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Information for unigene UN22521
| FASTA Sequence |
| Unigene ID: UN22521 | Length: 624 |
SSR | SNP | GGGTTAAACAGTGAGAGAGACAAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAAGATGAACAAGAAG
GAGATCTTCAAGCTAGCAAAGGGTTTCAGGGGAAGAGCGAAGAACTGCATAAGAATCGCGAGGGAGAGAGTGGAGAAAGCTCTTCA
GTACTCTTACAGAGACAGGCGCAACAAGAAACGTGAGATGCGAGGTCTCTGGATCGAGCGTATCAACGCCGGCTCTCGTCAGCACG
GTGTGAACTACGGTAACTTTATCCACGGACTGATGAAGGAGAACATCCAGCTGAACCGTAAAGTCCTCTCTGAGTTGTCTATGCAC
GAACCTTACAGCTTCAAAGCACTCGTTGACGTCTCCCGCAACTCCTTCCCTGGAAACAAGAACGTTGTCCAAGCCCCTCGGAAAGT
AGACATTTCTTCCATTAATGCCTAGTTATTATGAACATGTCTCTCCTTTCTTGTTCTCTTTCAAACAAGAACACATACCGTTTAGT
TATTTGTTTGAATCACATGAACACAAACAAGAGCTTCACAATCTTTGAGCCAATGTATTTCTGTCTTCTTATTTCGTTTACCAGTT
CTAAATCCATTGATTTGTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173118 Ribosomal protein L20 [Arabidopsis thaliana] | 635 | 2e-064 |
| XP_002890186 predicted protein [Arabidopsis lyrata subsp. lyrata] | 632 | 5e-064 |
| XP_002301732 predicted protein [Populus trichocarpa] | 604 | 9e-061 |
| XP_002530749 50S ribosomal protein L20, putative [Ricinus communis] | 576 | 2e-057 |
| ACU16475 unknown [Glycine max] | 554 | 6e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B6IPJ8 50S ribosomal protein L20 | 345 | 5e-032 |
| Q3YSX0 50S ribosomal protein L20 | 340 | 2e-031 |
| B3CRZ0 50S ribosomal protein L20 | 336 | 5e-031 |
| B3CLK2 50S ribosomal protein L20 | 335 | 7e-031 |
| A5CCZ4 50S ribosomal protein L20 | 332 | 2e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCN1 50S ribosomal protein L20 | 635 | 2e-064 |
| B9GNB5 50S ribosomal protein L20 | 604 | 6e-061 |
| B9SXN0 50S ribosomal protein L20, putative | 576 | 1e-057 |
| C6T465 50S ribosomal protein L20 | 554 | 4e-055 |
| A5BQX1 50S ribosomal protein L20 | 548 | 2e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G16740.1 ribosomal protein L20 family protein | 636 | 8e-067 |
| ATCG00660.1 encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex | 160 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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