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Information for unigene UN22611
| FASTA Sequence |
| Unigene ID: UN22611 | Length: 1238 |
| SNP | TTTTTTACTAGTAATGAAATTGATTCATTTGAAATGTTTGAAACATAGTGAAGATACACCGATTCTGTTTCTAGGCATTCACAAGC
CTACACATATGGGTTTGTTCTGTTCAAATAACCCTAAAATTGCAGTACTACAAGTAATGTTTTCAACACTTTTTTTTTACTTCGGT
TCTGTGTCGATGTCCCCTTGATCGACGGTCAAATCACCAACCTGTTAATCACGGGAGATTTAAGAAGACGATTCTGACATTTAGAT
GAGTTGTGCCTTTTTAAGGTCGGACACAACTCCTCTGTCTTGGCTGCTCCTTTCGTTGTAAACCACCTTATCAATGATTCCATACT
CAACAGCCTCACTGGGACTAAAATATTTAGGGCGTTTCATGTCAGCTTCAATCTGCTCCGGCGATTTACCAATATGCTTTGAATAC
AGCTTGACCATTTCTGTCTTTATGTGCCTGATTTCTTTCCTTGCAATTTCAACATCGGTTGCTTGTCCTTGGAATCGAGCAATGGG
CTGTTTTATCATTATAGTTGATGAGGGCAATGCAGAACGATTTCCTTTAGCACCAGCAGTCAGAAGCAAAGCAGCTTCACCCCAAG
CATTCCCAACACAAAGAGTAAAGATTGGTGGTTTGACATACCCCATGACATCATAAATTGCAAAAGCCTCAGTATCATAGCCCAAC
TTCTCACCATTCTTGGTCGTCCCTGTAGAGTTTATGTAGAGGTAAATAGGCTTTTCCTCGTCTTCATACTGAAGGTAAAGAAACTC
CGCGAGTATCAACTCAGTGACTGAAGGCACAAGAGACATTCCCAAATATACAATCCGGTTTTTGAACAGATAAGATGCCAGATCCG
GAGGAGGTTGTTCGTGTGCACTTCCTTTCGAAAAAGGTATAACCATGGTGACAACACCGCGCTTAGGCTTGGAGCTAGACATATTC
AACGGATTAAGCGATTCGGAACGAAGCTTGGCGCCGCAGAAGTCACTAGAGATGCTTCCTCCGGTATACGGGGAGAGTAAGCCGTT
CGAGAGGGCCGAAGCTCTGAGAGAAGAAGAAGACGAAGAGCATCTCACTTTAGATCTCAGGTTACGTGTTGGAGACGGGATTATCG
CGGAGGAACGAGCTCGGAGCGTTGTGAAGCTCGTCGCAGTCGCTGCTGCTACCTCCATTTTTCGTTTGGTTGCCGAGAGAGAGTCG
AGTGAGACCCCGAAACGATAACAGACGATTACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868088 hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp. lyrata] | 1459 | 2e-159 |
| NP_567521 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Arabidopsis thaliana] | 1446 | 7e-158 |
| AAL91164 unknown protein [Arabidopsis thaliana] | 1442 | 2e-157 |
| XP_002329556 predicted protein [Populus trichocarpa] | 1163 | 5e-125 |
| ACX50407 ATP-dependent Clp protease [Eriobotrya japonica] | 1136 | 6e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic | 1446 | 3e-159 |
| Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like | 439 | 2e-042 |
| P74466 Putative ATP-dependent Clp protease proteolytic subunit-like | 420 | 3e-040 |
| A1JNN2 ATP-dependent Clp protease proteolytic subunit | 327 | 2e-029 |
| Q60107 ATP-dependent Clp protease proteolytic subunit | 327 | 2e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PAS6 ATP-dependent Clp protease proteolytic subunit | 1163 | 3e-125 |
| D0EX73 ATP-dependent Clp protease proteolytic subunit | 1136 | 4e-122 |
| B9SZ03 ATP-dependent Clp protease proteolytic subunit | 1124 | 1e-120 |
| C6T8Y5 ATP-dependent Clp protease proteolytic subunit | 1108 | 8e-119 |
| Q0JNQ7 ATP-dependent Clp protease proteolytic subunit | 940 | 2e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17040.1 ATP-dependent Clp protease proteolytic subunit, putative | 1457 | 1e-161 |
| AT1G09130.1 ATP-dependent Clp protease proteolytic subunit, putative | 442 | 7e-044 |
| AT1G09130.2 ATP-dependent Clp protease proteolytic subunit, putative | 442 | 7e-044 |
| AT1G49970.1 CLPR1; serine-type endopeptidase | 419 | 3e-041 |
| AT5G23140.1 NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase | 271 | 5e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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