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Information for unigene UN22662
| FASTA Sequence |
| Unigene ID: UN22662 | Length: 1970 |
| SNP | GCCATCAAAGATAACTGACTTCTTCCAGCTAAGAAACTGATAAAGGACTTGCAATTAGTTTACTCTCTGCTGATAAGTTTCGGAAT
AAGATACAGTATAAAGCGTTGGTGAAACGTTGGAGAATCATCTTACATATAACATTGGCCACTGCAAAAAGATATTGAGATTTTCA
AAAGACCAATGCATAGGCCATCAAGCTGCGTAGTCAGGCATTGCTTTCTTGAGGAATGTTATCGGCTGCGACTCCTCTGGGGCTAA
TCGGTCAAAAGGAATGTAGTTCTCCTCTTTGTCATAGACATGGCACACAGTCATTATTGTCTTCATCAAGCGCCAGTTCCATGTAG
CCAAGTTTGTGTACTTTCCCCAGTTCTCTTGAATAGACTCATGAGCCGCACGAAGATTGTAGCTCGGTATCCTTGGGCTAATGTGA
TGTGGGATGTGTACATTGATATCATGGCACAGAATCTCAATCCAACTAGGATAATCACAATGAACAGTTCCGTTAAGCTGTGCCTG
AGCCGCGTTCCACTCATCCGCAGACTTGAAAGGAATGTGTGGAGCTGTATGATGAACCATCGTGAACGTGCTCATCCAAAAGTGAT
AGCCCAACCACGGCATCAACCAGAACTTCACCCATCCCAAAATGCCAACTTTGTATATGATCAGTGGCCACCCAACGGCCATGAAG
GCGAAAACACAAGCCAAACTTATCTTCACCCTATTCACTTCGCTTGGTCTGAATTTTCTCAGATTGAAGTGCCAGTTCACCCAGTG
AGCTATGGACAACCAAGGCCGAATTGGACCATATCCAAGAATGATTGCTTTTCGCAGAACGGGTGATGAATCAAACTCCTCTGGTG
GAACTGGTTGCCAAGCTGTGTCATGAACTAACATGTTGGTTTTGGCGTGATGACGGTCGTGCTTAAATCTCCATGGCTCATAGGGG
TATACAAGAGGTAGGAAGGCTAGAGTACCCACAATGTCTTCAACCAATTTGTTCTTGGAAAATGATTTATGAGCACAATCATGTCC
TATCACAAAGAACCCTGTAACTGCAGTTCCTGTCCAAGCCCAAGCCAACGGAAGCAGATACCAAGGGGCTTTTGCGATCATGAAGA
GCCCTAAAGCGTAGGAAGTCACAGATACCAACACAGACTTCCAAGCCTTGACATCATCAATCTCAAACACCTCTTTGGGAAGTGTA
TCCATGATATCTTTTAAAGTGACATTATCAGGAAGATCTTGTCCAATTTGTTTGAACCCATAGCTTTCTGCTAACTGCTCCCTCTC
TTCCGCACTGTCAGCTGAAGGAGGTGCGGCTGGAGCAGCCACCGCTTTTATACATCCAACCCTTTTCTTTGCAGGAACCAAGAACG
TTCTCCTTCTATGCGCATGACCTCTTAACAGAAGATCAATCGGTCTCACAGCATACACACCTGGAGAAAGACGAGCAGGAGCAACT
TGAGGAGCCCTAGGGAGACATTGTTGTGGGCCCGTGAAGGCGAATAGAGAATCAGCAATTCTCGAAGCCATGGAAGAGGGGGCGAA
CAAAGTTGGAGAAGCCACAGGAGTTTCTCTGCAAATGTTTTTTTCTTAAAAGGGATTGAATGGCTGTGAAGAGTCCTCTCACCTCT
TCAAGTTCATACCACAAAGGGTTTTGGGGTTTTCTTTTCTTTATATCAGAAATTAAAAAAAAAATTGTATAATCAAAATACGCAAA
GTATTTATATCAGAAAACTAGGGTAGTATTTGACCCGTCACAGGAAAAATATACTATCTGACTACATTTGACATTTGGCGAAAAAA
AGTACAACTTATTTGAGATCAATAATAAAAAAATACAGTTAAGATAATTATCAATTTATACCAGTAATTTTAAATTTTCGAACTGT
AAATGAAAATTAATTACTAGATAAACTGAAAGTCTCAATAAAAAAACAGGTTAATTGGCTCGCAAGTGGTGCTAGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P48627 RecName: Full=Omega-6 fatty acid desaturase, chloroplastic; Flags: Precursor | 2340 | 3e-261 |
| AAT65203 omega-6 desaturase [Brassica napus] | 2325 | 2e-259 |
| AAT65208 omega-6 desaturase [Brassica napus] | 2321 | 5e-259 |
| XP_002867319 omega-6 fatty acid desaturase [Arabidopsis lyrata subsp. lyrata] | 2287 | 4e-255 |
| ABI73993 omega-6 fatty acid desaturase [Descurainia sophia] | 2283 | 1e-254 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48627 Omega-6 fatty acid desaturase, chloroplastic | 2353 | 4e-264 |
| P46312 Omega-6 fatty acid desaturase, chloroplastic | 2280 | 1e-255 |
| P48628 Omega-6 fatty acid desaturase, chloroplastic | 1718 | 2e-190 |
| P48629 Omega-6 fatty acid desaturase, chloroplastic | 1650 | 1e-182 |
| P20388 Fatty acid desaturase | 994 | 1e-106 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6DUV9 Omega-6 desaturase | 2325 | 1e-259 |
| Q6DUV4 Omega-6 desaturase | 2321 | 3e-259 |
| Q09GN7 Chloroplast delta-12 fatty acid desaturase | 2283 | 8e-255 |
| A9PGN3 Putative uncharacterized protein | 1884 | 1e-208 |
| A7XZU9 Chloroplast omega-6 fatty acid desaturase | 1877 | 9e-208 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G30950.1 FAD6 (FATTY ACID DESATURASE 6); omega-6 fatty acid desaturase | 2281 | 7e-257 |
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 319 | 2e-029 |
| AT2G29980.2 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 244 | 1e-020 |
| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 191 | 2e-014 |
| AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | 188 | 4e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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