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Information for unigene UN22734
| FASTA Sequence |
| Unigene ID: UN22734 | Length: 1331 |
| SNP | GGATCCATTGTAAGGAAGAAAAACACAATCTTCACCAACAAAAGCGGCGTTGATTCTCCGATTTCACGAGACAAGAAAATCTCAAA
GTTTCTCGTTGTTAGGGTTTGCGAGATACATTGGGTTTTTTTTTGAGTCATGGGTTTAGAGAAGAAATCTGCATTGTTGGAAGATT
TGATAGAGAAATGCGGCGGCTGTGCGGTGGTCGACGGCGGTTTCGCAACCCAGCTCGAGATTCACGGCGCCGCCATTAACGACCCT
CTGTGGAGTGCCCTATCTCTCATCAAAGATCCTGAACTCATCAAGCGGGTTCATATGGAATATTTGGAGGCTGGTTCAGACATTGT
GGTTACTTCATCTTATCAGGCTACAATCCCTGGCTTTCTCTCAAGAGGACTGTCGATGGAAGAGAGCGAGTCTTTGCTACAAAAGA
GCGTGAAACTAGCTGTTGAAGCCCGTGATAGATTCTGGGACAAAATCAGCAAAACCTCAGGACACAGCTATAACCGAGCTCTTGTA
GCTGCTTCTATTGGTAGCTATGGAGCTTATCTCGCTGATGGCTCTGAGTACAGTGGAAGCTATGGCGAGGATGTAAGCTTGGACAA
ACTAAAAGACTTCCACAGGAGGAGAATCCAAGTCCTAGTGGAAGCTAGTCCAGATCTTCTCGCTTTCGAAACCATACCTAATAAAC
TCGAGGCTCAGGCGTGCGTTGAGGTGCTGGAGGAAGAGAATGTGCAAACCCCAGCGTGGATCTGCTTCACATCTGTAGATGGTGAG
AATGCTCCTTCAGGTGAGAGCTTTGAGGAATGCCTTGAAACCCTTAACAAAAGCAACAACATTTGCGCTGTTGGCATTAACTGCGC
ACCTCCTCAGTTCATGGACAATCTCATTCGCAAATTCTCCAAGCTGACCAAGAAGGCCATCGTTGTGTACCCAAATAGTGGAGAGG
TTTGGGACGGGAAAGCCAAAAAATGGCTGCCATCGCAATGCTTTGGTGATGCTGAGTTTGAGATGTTTGCACCGAAATGGCGTGAC
CTTGGAGCTAAACTTATAGGAGGATGCTGCAGGACTACACCTTCCACCATCAGAGCTATCTCCAGAGATTTGAAACGAAGATGAGT
TCCCTCAGGGAAGAAAAGATTGAAAGATTTCACTTCTTTTAATTCGTTTGACGACTCATTATTAGGGCTTTTATTTATTTATTTAT
GGACTGTGTTGTTTTCTTGCCTCTTAAGTTTCCTTTGTTGTTTAATTATATGTATCCGTAAACTAGGCCTTGGGCTTTTTTCGTAT
GAGTGCCCATATATGATAATTTTTATCTTTCCACAAAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| A4ZGQ8 RecName: Full=Homocysteine S-methyltransferase 1; Short=BoHMT1 | 1661 | 9e-183 |
| NP_189219 homocysteine S-methyltransferase 1 [Arabidopsis thaliana] | 1566 | 1e-171 |
| XP_002875290 ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata] | 1560 | 5e-171 |
| XP_002282549 PREDICTED: hypothetical protein [Vitis vinifera] | 1389 | 3e-151 |
| XP_002531629 5-methyltetrahydrofolate:homocysteine methyltransferase, putative [Ricinus communis] | 1377 | 8e-150 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SDL7 Homocysteine S-methyltransferase 1 | 1566 | 4e-173 |
| Q9FUN0 Homocysteine S-methyltransferase 1 | 1164 | 2e-126 |
| Q8LAX0 Homocysteine S-methyltransferase 3 | 968 | 9e-104 |
| Q9M1W4 Homocysteine S-methyltransferase 2 | 935 | 6e-100 |
| Q9FUM9 Homocysteine S-methyltransferase 2 | 908 | 8e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A4ZGQ8 Homocysteine methyltransferase 1 | 1661 | 6e-183 |
| B9T060 5-methyltetrahydrofolate:homocysteine methyltransferase, putative | 1377 | 5e-150 |
| B9HWH8 Homocysteine s-methyltransferase | 1356 | 1e-147 |
| Q3EB03 Putative uncharacterized protein At3g25900.2 | 1211 | 1e-130 |
| B8AQV5 Putative uncharacterized protein | 1190 | 3e-128 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25900.1 HMT-1; homocysteine S-methyltransferase | 1567 | 3e-174 |
| AT3G25900.2 HMT-1; homocysteine S-methyltransferase | 1211 | 5e-133 |
| AT3G22740.1 HMT3; homocysteine S-methyltransferase | 968 | 8e-105 |
| AT3G63250.1 HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2); homocysteine S-methyltransferase | 935 | 5e-101 |
| AT3G63250.2 HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2); homocysteine S-methyltransferase | 802 | 1e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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