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Information for unigene UN22873

FASTA Sequence
Unigene ID: UN22873Length: 656  SNP
GGAACCACAGAATCATGAATCTTAACTTCTTATCTAGTTCTCTCTTCTTGTTTCTACTACTCTCAGTATTTTCGAGCTTCATCTCA
GATAGTGCATTCATCAAATCTGAAACTTTGGCTAATGGAAGAAATCTGCTTCAGAAGAAGAAAGCATGTCCAGTGAACTTTGAGTT
TATGAACTACACAATCATAACAAGCCAATGCAAGGGTCCCAAATACCCACCCAAGAAGTGTTGCACCGCATTCAAGGAATTTGCAT
GTCCTTACGCTGATGAGCTGAACGACTTGAGCAATGATTGTGCAACCACTATGTTCAGCTATATCAACCTATACGGTAAATACCCA
CCGGGACTGTTTGCAAACCGATGCCAAGGTAAAGGAGGTCTCAAGTGCCCCGGTCAAATATGAATTTCTACTCTAGTTTAACAGGG
TGGTCATAGCCTTCCTATCTTCAATAATGTTCTTATTATAATCAACTTTATCAATAATTGTAGTCAAAATAAATTGTGGAGGAGAC
TCCATTGCATCACATGGTCTTAGCCTTCATATTTTCAATTCATAATATGGTCCTAGCCTTTCATATTTTCAGTTAATAATATGTAT
CTTAACATGATGAATATCAAGAAGCTATAAAAGTGCTCTTATGTCTACCTGTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200428 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 [Arabidopsis thaliana]5081e-049
XP_002864439 hypothetical protein ARALYDRAFT_495704 [Arabidopsis lyrata subsp. lyrata]5019e-049
XP_002531774 conserved hypothetical protein [Ricinus communis]4695e-045
XP_002272406 PREDICTED: hypothetical protein [Vitis vinifera]4589e-044
ACU16228 unknown [Glycine max]4571e-043

Swiss-Prot top hits (Blast detail)Scoree value
B3GS44 GPI-anchored protein LORELEI3752e-035

TrEMBL top hits (Blast detail)Scoree value
Q9FKT1 Putative uncharacterized protein At5g561705081e-049
B9T0K5 Putative uncharacterized protein4693e-045
C6T3J0 Putative uncharacterized protein4578e-044
A2PZD8 GPI-anchored protein4532e-043
B9T0K4 Putative uncharacterized protein4443e-042

Arabidopsis top hits (Blast detail)Scoree value
AT5G56170.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: LRE (LORELEI) (TAIR:AT4G26466.1); Has 71 Blast hits to 71 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5086e-052
AT4G26466.1 LRE (LORELEI)3752e-036
AT2G20700.1 unknown protein3374e-032
AT4G28280.1 unknown protein3204e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
69  31%
 
96  21%
 
112  7%
 
103  10%
 
84  14%
 
123  10%
 
72  7%

Unigene MembersMember information