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Information for unigene UN22888
FASTA Sequence |
Unigene ID: UN22888 | Length: 1708 |
SSR | | GGACCAACATCTATCCATCTTCTCCGATCAGAATCTCTCTCTCTCTCTTCTCAGCTTCTTGTGTGACTTACACTTGTGAGAAATGG
CCACCGCAGTTTCCACCGTGGGTGCCATCAACAGAACTCCGTTGAGCTTGAACGGGTCAGGAGCAGGAGCTGCTTCAGTCCCATCT
ACCACCTTCTTGGGAAAGAAAGTTGTAACCGCGTCGAGATTCACACAGAGCAACAACAAGAAGAGCAACGGATCATTCAAAGTGGT
TGCTGTGAAAGAAGACAAACAGACCGATGGAGACAGATGGAGGGGACTTGCCTACGACGTGTCTGATGATCAACAAGACATCACCA
GAGGCAAAGGTATGGTAGACTCTGTCTTCCAAGCTCCTATGGGAACCGGAACTCACAATGCCGTTCTTAGCTCCTATGAGTACATT
AGCCAAGGTCTTAAGCAGTACAACTTGGACAACATGATGGATGGGCTTTACATTGCTCCTGCTTTCATGGACAAGCTTGTTGTTCA
CATCACCAAGAACTTTTTGACCTTGCCTAACATCAAGGTTCCACTTATTTTGGGTATTTGGGGAGGCAAAGGTCAAGGTAAATCCT
TCCAGTGTGAGCTTGTCATGGCCAAGATGGGCATCAACCCAATCATGATGAGTGCTGGAGAGCTTGAGAGTGGAAACGCAGGAGAA
CCAGCTAAGCTGATCCGTCAAAGGTACCGTGAGGCAGCAGACCTTATCAAGAAAGGAAAGATGTGTTGTCTGTTCATCAACGATCT
CGACGCCGGTGCTGGTCGTATGGGTGGTACCACTCAGTACACTGTCAACAACCAGATGGTTAACGCAACCCTCATGAACATTGCTG
ATAACCCAACAAACGTCCAGCTCCCAGGAATGTACAACAAGGAAGAAAACGCACGTGTCCCCATCATCGTCACAGGTAACGATTTC
TCCACTCTCTATGCTCCTCTCATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCCCCGACACGTGAAGACCGTATTGGTGTCTG
CAAGGGTATCTTCAGGACTGACAATGTCCCGGACGAAGACGTTGTCACGCTTGTTGACAAGTTCCCTGGACAATCTATCGATTTCT
TTGGTGCATTGAGGGCTAGAGTGTACGATGATGAAGTGAGGAAGTTCGTTGAGGGACTTGGAGTGGAGAAGATAAGCAAGAGGCTG
GTGAACTCAAGGGAAGCTCCTCCGGTGTTTGAGCAACCGAAGATGACTCTTGAGAAGCTTATGGAGTATGGAAACATGCTTGTGAT
GGAGCAAGAGAACGTCAAGAGAGTCCAACTTGCTGACCAATACCTTAACGAGGCTGCGTTGGGAGACGCAAACGCTGACGCCATTG
GCCGCGGAACTTTCTATGGTTAGAACTCGAGGGAAAGCAGCACAGCAAGTGAACGTTCCTGTTCCAGAAGGGTGTACTGATCCTCA
AGCCGAAAACTTTGATCCAACAGCTAGAAGTGACGATGGAACTTGTGTCTACAAGTTTTGAGTTTCCTCCTTGTTAAGTTGCTGTG
TTTCTAATGTTGTTTGTCTCTCTCTCTTTTTTTTTTTTTTTTGCCTTTTGTGTTACTGTGGATTGGTTCATGTCCTCTCTTTTTTT
TTGTGATCATGTGCAAACATTAATATTGTAAGATTGCATTGTCATAAACCATTTCTCAACTTTTTGTTTGCTTT
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GenBank top hits (Blast detail) | Score | e value |
BAJ33718 unnamed protein product [Thellungiella halophila] | 2147 | 6e-239 |
XP_002881673 hypothetical protein ARALYDRAFT_482998 [Arabidopsis lyrata subsp. lyrata] | 2131 | 4e-237 |
NP_565913 ribulose bisphosphate carboxylase/oxygenase activase [Arabidopsis thaliana] | 2121 | 6e-236 |
NP_850320 ribulose bisphosphate carboxylase/oxygenase activase [Arabidopsis thaliana] | 2117 | 2e-235 |
NP_850321 ribulose bisphosphate carboxylase/oxygenase activase [Arabidopsis thaliana] | 2117 | 2e-235 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic | 2126 | 7e-238 |
Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic | 1897 | 2e-211 |
Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic | 1886 | 4e-210 |
Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic | 1859 | 6e-207 |
Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic | 1859 | 6e-207 |
TrEMBL top hits (Blast detail) | Score | e value |
Q3EBJ5 Putative uncharacterized protein At2g39730.3 | 2117 | 1e-235 |
Q941B7 At2g39730/T5I7.3 | 2114 | 3e-235 |
Q8H172 At2g39730/T5I7.3 | 2108 | 1e-234 |
A5C3D4 Putative uncharacterized protein | 1909 | 2e-211 |
Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 | 1885 | 9e-209 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G39730.1 RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | 2126 | 6e-239 |
AT2G39730.2 RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | 2122 | 2e-238 |
AT2G39730.3 RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | 2122 | 2e-238 |
AT1G73110.1 ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative | 803 | 1e-085 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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