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Information for unigene UN22927

FASTA Sequence
Unigene ID: UN22927Length: 1734  SNP
TTTTTTGATCAGAAAAAAAAAAAAAGAAAAAGAAACAGAGATCACTGTTGTGTTCAAAAAAAAAAAACAGAGATCACTGTCGAGAT
CTGCTTTTGTTTTAATTTTGTTTCTTCTTTGTCGCAGCCATGGTTTCCACCACTAAGATCAAGTCCGTTGATTTCTACAGAAAAAT
CCCAAGAGATTTGACAGAGGCATCTCTCTCCGGTGCTGGTTTATCCATTGTAGCTGCCCTCGCTATGATGTTTTTGTTTGGAATGG
AGCTGAGTACTTATTTGGCAGTTACCACTCAGACATCTGTAATAGTTGACAATAGCTCTGATGATGACTTCTTACAAATTGATTTC
AATGTCAGCTTTCCTGCTCTCTCATGTGAATTTGCATCTGTTGATGTAAGCGACGTGTTGTCAACTAACAGGTTGAACCTAACGAA
AGAAATAAAGAAAGTTCCAATCGATCCGCATTTAAGAGAAACTGGGGAGGAGTACCACCCCACCCCTAACTTAGATCTCATCCACC
ATGGAGACGAACATCAGGTCGACGACAATGCTTATGCTGCTATATCTTTAACTGGTGCTATTTTTGACAAGATTTCACATAAATTC
CCAATTTTGGTTGTTAACTTCTATGCGCCATGGTGCTACTGGAGTAGTCGCTTGAGACCATCTTGGGAGAAAGCAGCTGAGATTAC
AAGCAGAAATATGGTCCTGATAGTGATGGGCGTGTCCTACTTGGAAGTGTTGATTGCACTGAAGAACCTGCTCTATGTACAAAGTA
TCATATACAGGCTATCCATCTATTCGTATCTTCCACAACGGTAGTGATCTTAGGGACGATCATGGGCACCAAGAACATGATTCTTA
CCATGGAAATCGGGACACAGAGAGCTTAGTCAAGATGGTGGATGAACTGCTCAGACCTATCAAGAAGTTTGATGGTACACCTAATC
ATGCGGCTTCAAGTATTAGAAAGGCACCAGTTAGTGGAGGCTGTAGAATCGAAGGCTATGTGCGTGCCAAGAAGGTTCCTGGTGAA
CTCGTTATCTCAGCTGTTTCAGGGGCTCATTCATTCGATGCTTCTCGAATGAACATGACACATTTTGTAAACCATCTATCGTTTGG
TAGGATGATTTCAGCTAGGTTGTTGACTGATATGAAACGGTTACTGCCTTATCTTGGTCTAAGCCATGACAGGCTTAATGGAAAAT
GGTTCGTTAATGAAGGAAAGTTTGCTGCTAATGTTACTATCGAACATTATCTTCAAGTAGTAAAAACAGAAGTCGTTTCAAGAAGG
TTCGGTCAAGAATACTCAGTGATTGAGGAATATGAATATACAGCTCATAGCAGTGTGGCTCATGGTTACTATTACCCTGTTGCAAA
GTTTCACTTCGACCTCTCTCCTATGCAGGTCATGATAAGCGAGAACCCAAAGTCATTCTCACACTTCGTTACAAATGTTTGCGCCA
TAATAGGTGGTGTTTTCACGGTTGCCGGGATACTAGATTCGATATTTCAAAGCACTTACGGAATAATGAAAAAGGTCGAACTAGGG
AAGAACTTTTGAAAGGGAGGAGTGAGTGATTACAAGTTGAATTTTTCAGTTTTATTTTTATGTCTACAAAACCATAGAAGAAGATC
TCGGTTCTTAAATAATTTGTAGACTCTGTTTGTTTTGGAATAAAAGTTCCAAAGAGAAGATAAATAATAGCATCTTGATGATTCTT
GATCTTTATCCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891602 hypothetical protein ARALYDRAFT_474215 [Arabidopsis lyrata subsp. lyrata]10794e-115
NP_175508 protein Disulfide Isomerase (PDIa) family, redox active TRX domain-containing protein [Arabidopsis thaliana]10517e-112
AAG50943 hypothetical protein [Arabidopsis thaliana]10517e-112
XP_002883258 hypothetical protein ARALYDRAFT_479582 [Arabidopsis lyrata subsp. lyrata]10302e-109
NP_566664 protein PDI-like 5-3 [Arabidopsis thaliana]10194e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q5EAE0 Endoplasmic reticulum-Golgi intermediate compartment protein 31955e-014
Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein 31955e-014
Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 31955e-014
Q4R8X1 Endoplasmic reticulum-Golgi intermediate compartment protein 31955e-014
Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 31955e-014

TrEMBL top hits (Blast detail)Scoree value
Q9C6I5 Putative uncharacterized protein F8A12.1710515e-112
Q9LJU2 AT3g20560/K10D20_910193e-108
B9SA45 Thioredoxin domain-containing protein, putative9162e-096
B9I7L4 Predicted protein9135e-096
B9I0B4 Predicted protein8893e-093

Arabidopsis top hits (Blast detail)Scoree value
AT1G50950.1 thioredoxin-related10522e-114
AT3G20560.1 ATPDIL5-3 (PDI-LIKE 5-3); protein disulfide isomerase10201e-110
AT4G27080.1 thioredoxin family protein8892e-095
AT4G27080.2 thioredoxin family protein8892e-095
AT1G36050.2 unknown protein1751e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  5%
 
63  14%
 
88  36%
 
93  14%
 
121  5%
 
104  18%
 
72  9%

Unigene MembersMember information