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Information for unigene UN22946
| FASTA Sequence |
| Unigene ID: UN22946 | Length: 1084 |
| SNP | GGACTTTCATCACAACTTAACCAGCCAGCTCACGAGAGAGACAGATACAGAGAGAGAAAATGGCGTACAGCGCGTGCTTCCTACAT
CAGAGCGCACTGGCCTCTGCCGCCACACGATCATCATCTTCCTCCTCATCCCAGCGTTACGTTTCACTCTCCAAGCCCGTCCAGGT
AGTGTGCAAAGCCCAACAGGCTCATGAAGACGATAACTCCGCCGTCTCTCGCCGTCTCGCTCTCACACTCCTCGTTGGCGCCGCTG
CAGTTGGTTCCAAAGTATCTCCCGCCGATGCTGCCTACGGTGAAGCTGCAAATGTGTTTGGGAAGCCAAAGAAGAACACAGACTTC
ACGGCATACAGTGGAGATGGGTTCCAAGTGCAGGTGCCAGCTAAATGGAACCCAAGCAGAGAGGTAGAGTATCCAGGACAAGTCCT
TAGGTACGAAGACAACTTCGATGCTACTAGCAACCTCAATGTCATGGTCACCCCTACCGACAAGAAGTCCATCACTGATTACGGCT
CTCCTGAAGAGTTCCTCTCTCAGGTCAATTACCTCCTTGGGAAACAAGCTTACTTCGGTGAGACTGCCTCTGAGGGAGGCTTTGAC
AACAATGCAGTGGCAACAGCAAACATTCTGGAGACTAATGTTCAGGACGTTGGTGGGAAACCATACTATTACTTGTCCGTGTTGAC
AAGAACGGCCGATGGAGACGAAGGAGGTAAGCATCAGCTGATCACAGCCACCGTGAATGGAGGCAAGCTGTACATCTGCAAAGCAC
AAGCTGGAGACAAGAGGTGGTTCAAGGGAGCCAACAAATTTGTCGAGAAAGCAGCCACTTCTTTCAGTGTTGCTTGAATGTAAAAG
CAACTCAAACAGAACAGAACAATGCTTTGCTTTCTTTCTTCATTTGTCTCTTTGTAAAAAAAGGATAATGAAACTAAGCTTTTGAG
AAACCTATCAAGATGATGATGCTATATATCTTTGCGGCTTTACTTGTTTACGTGTGGTAAACAGGACTCTAGCTTTCTATGCTTGA
TCAAAAATTTGAATATCATATGTATAATCAATTATCAATGAAACAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ34178 unnamed protein product [Thellungiella halophila] | 1311 | 3e-142 |
| NP_172153 oxygen-evolving enhancer protein 2-1 [Arabidopsis thaliana] | 1268 | 3e-137 |
| XP_002889614 oxygen-evolving enhancer protein 2 [Arabidopsis lyrata subsp. lyrata] | 1268 | 3e-137 |
| P11594 RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic; Short=OEE2; AltName: Full=23 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=23 kDa thylakoid membrane protein; AltName: Full=OEC 23 kDa subunit; Flags: Precursor | 1267 | 3e-137 |
| CAA68801 23 kD subunit [Sinapis alba] | 1207 | 3e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P11594 Oxygen-evolving enhancer protein 2, chloroplastic | 1283 | 2e-140 |
| Q42029 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1268 | 1e-138 |
| Q96334 Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) | 1083 | 3e-117 |
| Q7DM39 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1079 | 9e-117 |
| P29795 Oxygen-evolving enhancer protein 2, chloroplastic | 1023 | 3e-110 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q04126 23-kDa ploypeptide of photosystem II oxygen-evolving complex | 1063 | 1e-113 |
| B9S6F7 Oxygen-evolving enhancer protein 2, chloroplast, putative | 1015 | 4e-108 |
| A9PGP9 Putative uncharacterized protein | 987 | 7e-105 |
| A9PHM0 Putative uncharacterized protein | 978 | 7e-104 |
| C6T8W8 Putative uncharacterized protein | 969 | 8e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06680.1 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 1269 | 8e-140 |
| AT2G30790.1 PSBP-2 (photosystem II subunit P-2); calcium ion binding | 1074 | 3e-117 |
| AT1G06680.2 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 889 | 9e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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