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Information for unigene UN22962
| FASTA Sequence |
| Unigene ID: UN22962 | Length: 1614 |
SSR | | CGATGTAATAATTTATAAGTGCCACGAATTTCGAATAAACCAATCTAAAGTCGAAACCAAAATGGATGTAAACCAATAGAAAGATG
ACAACATAGAAAGAGTTTTAAGCAATTCTGTCACAAAAGAGCAGTTGTTAAATCCCAGAAAAACTCTACGATTCAGAGGTTGCAAG
GACTCTAGAAGATATCAAAACACTAGTAACAGAGTAAGCACCCTGTGGAGATAGAGGTGGGGGTGAAGAAGAGCATCTCTCACTTG
AAGCACTTGGCGTCCAAAAGGGCCTCACCTTCAAAAGGCTCGGCATCTTCAATCATCTGGCTAACACGCTCTTTCTGTGCTTCGTC
AGAGATATCAACTTTGGTCCACTCGTAGAGCTCCATGTCGTAAACCTCATCCATAATGAATTTGGGGATTTCTGGTCCACGGAACA
GCCACAAACCCTTCACCTGAAAGGGAGCCTCTGACCCGCAAATGAGCATCTTTCCAAAGGCATATTTACGTGCCAAGTCCATTCGC
TGGAGGAACCCACCAACCTTGTTCAGTGTAACAAACGAAACCATGTTCTCGTCGTTGTACTTGTAGTCACAGAACCATAGCGAGTA
TCCCTCTGGATCGTACATGTCCCAGAATCCTTTGATTGCAACCTCACGGAAGTTGGACTTGGTGTTGGAGTAAAGCCTCTTCCACT
CATCAAGAACCATTGGGCTAGGAGGTAGCAAATCAAGAGGATTCTTGGCCTTGGGCTTTGGTGCTTCTTCCTCCTCAGCAAACTTG
GGTGCCTCTGCTGCAGGGGCAGGCTTCTTAGGCTCCTCTTGGGCTTTGCAGGCTGTGCAGCTTTCTTAGAAGGAACAGGAGGGACA
GCTTGGGTCTGCTTGGCATCACCAATCACCTTCTTGAAGTTGGGTTGGTTGACCATTGTCCAGAAGTATCTCTCAACATGAGGGAA
CTCAGAGGTGAAGCTCTTGGTCATGACGGTGGCAAATCCCAAGTTCAAGTTGCAGATGGTTACAATATCCGCGAGGGTAACAGAGT
GTCCAACGAGGTAAGTGTTGGAGGCGAGATGGGTGTTAAGAGCATCAAGTCCTCTCTTCAATCCAGCAATAGCAGCTTCCTCAGCA
GGAGCAGAGAAAGGAGCATAGCCCATCCTTGGAGCGAACCACCTCAGCATGTTAGCATCAATCTCCAACGAGGCAAAATCAATCCA
TTGCTCAATGTGAGCGTAATCAATGAGGGATGATCCATTCAAAGGGCTGTCACCATTCACACGGCTCACGTAACGGGTAATGGCAT
TGCTCTCAAAGATGGGACCTTGTGGAGTCTCAAGCACGGGAACCTTTCCAATGGGGTTCATCTTGAGAAACTCGGGAGATTTGTTG
GTGACGCCCATCTGAAAGTTGGAGGCCTCCTCGATCTTGACACCTGCATACTCTGCAGCGATGAGTGCCTTGTAGGCACCTTTGTT
TCCCTTGTAAGTGTGTAGAACCAAAGCCATTGCTCAGACGGAAATGAATAAAGAGCTACGAACGAATTGCGAGGGTTCTGAGTTCA
GATGCGAATTTTCCGTAAAGCGAGAGAGAGAGAGAGGAAAGGAAACGACCGCGGAAAACACTATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892012 hypothetical protein ARALYDRAFT_474857 [Arabidopsis lyrata subsp. lyrata] | 1087 | 4e-116 |
| NP_176084 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 1079 | 4e-115 |
| AAK59587 putative elongation factor 1B gamma [Arabidopsis thaliana] | 1079 | 4e-115 |
| BAH56923 AT1G57720 [Arabidopsis thaliana] | 1079 | 4e-115 |
| XP_002889762 hypothetical protein ARALYDRAFT_471063 [Arabidopsis lyrata subsp. lyrata] | 995 | 2e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FVT2 Probable elongation factor 1-gamma 2 | 1079 | 2e-116 |
| O04487 Probable elongation factor 1-gamma 1 | 989 | 4e-106 |
| Q9ZRI7 Elongation factor 1-gamma 1 | 911 | 5e-097 |
| Q6YW46 Elongation factor 1-gamma 2 | 902 | 5e-096 |
| Q9FUM1 Elongation factor 1-gamma | 888 | 2e-094 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2J4 AT1G57720 protein | 1079 | 3e-115 |
| B9DHI9 AT1G09640 protein | 989 | 7e-105 |
| Q0E2Q6 Os02g0220600 protein | 911 | 8e-096 |
| C5XY44 Putative uncharacterized protein Sb04g007760 | 899 | 2e-094 |
| B7SDI2 Elongation factor 1-gamma | 891 | 2e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G57720.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1079 | 1e-117 |
| AT1G57720.2 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1079 | 1e-117 |
| AT1G09640.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 989 | 4e-107 |
| AT2G30870.1 GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | 173 | 2e-012 |
| AT2G30860.1 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase | 151 | 5e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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