 |
Information for unigene UN22986
| FASTA Sequence |
| Unigene ID: UN22986 | Length: 1340 |
| SNP | GGTGGAGGATCTCTCGCCCCCAAATCCTCCTCTCAAGAGAAAACCCTTAACACACTTCTTCTTCTCCTTCCCTTCTACTCTCGCCG
TAAGTGATTTTTTTCGGTAGCGACGGCGATGGCGGATCTTTTCCCACCTCTCGTGACGGCTCAAATCGACGACAAGCCTAAAGCCG
ACGAGAAAGTCGATTACTCGAATCTCCCTTGCCCTGTTCCCTATGAGGAACTCCACCGCGAAGCTTACATGTCTTTAAAGCCAGAC
ACTTTCGAGGGTCTACGCTTCGACTTTACCAAGGGGTTGAATCAGAAGTTTGGTCTCTGCCACAGTGTAATGATGGGGCCAACCGA
AGTTCCTTCTCAGTCGCCTGACACGGTGATTAAAATTCCAACTGCCCACTATGAGTTTGGTGCCAATTATATTGACCCGAAGTTGA
TGCTTGTTGGAAGGGTTATGACTGATGGTAGACAAAGTGCAAGAGTGAGAGCTGATTTAACTGATAAGTTGATGGTGAAGGCGAAT
GCTCAGCTTGCAAATGAGCCTCATATGTCGCAAGCAATGTTCAACTTTGATTACATGGGATCAGACTACAGAGCCCAACTTCAATT
TGGGAACAATGCTCTAGTTGGAGCAAACTATATTCAGAGTGTGACACCCCGTCTATCTTTGGGTGGGGAAGTTTTCTGGGTTGGTG
TCCCTCGGAAGTCGGGTATAGGTTACGCTGCAAGATGAACAACTGATAAGATGGTCGCCTCTGGGCAAGTTGCTAGCACTGGTCTT
ATGGCTATGAACTATGTTCAGAAGGTTTCCGATAAGGTCTCACTTGCCACTGATTTTATGTACAACTACTTTTCAAGAGAAGCTGT
AGCTAGTGTTGGGTATGACTACATGCTCAGACAGTCTCGTGTGCGGGGAAAGATAGATTCGAACGGTGTTGCATCCGCTCTTCTGG
AAGAAAGATTGAGTATGGGACTCAATTTTCTTATGTCTGCAGAGCTTGACCATAAGAAGAAGGACTACAAGTTTGGATTCGGTTTA
ACAGTCGGCTAATAAGCACAGCGACGCACGGAATAAGCCCTGGCAGCTGCAGCTGTTGTGCGGGGGGATCGGTTCAATTTTATTAT
ATTCTCCCTTCAAGATTTTCAGTTTAGGCTATTTTCGTTGGGAAGTTGAACAAAAAACAAAGGAAATATTGTGTTGTTTATTTGCG
GTTTAGGTTTTCTCTCCAAGAACATCCAATTAAAGGAGGTTTTTTTTTGTGTTTTTACTTTCTTGCTTCAGGTCTCGTATACTACT
ACCGAGAGGTCTATTCATTTCCTTTTTATTGAAGAATAAATCAGTTAGAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188634 mitochondrial import receptor subunit TOM40-1 [Arabidopsis thaliana] | 1358 | 1e-147 |
| XP_002883221 hypothetical protein ARALYDRAFT_479518 [Arabidopsis lyrata subsp. lyrata] | 1339 | 2e-145 |
| XP_002513130 mitochondrial import receptor subunit tom40, putative [Ricinus communis] | 1219 | 2e-131 |
| XP_002264051 PREDICTED: hypothetical protein [Vitis vinifera] | 1195 | 1e-128 |
| CAN64867 hypothetical protein VITISV_027855 [Vitis vinifera] | 1193 | 2e-128 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LHE5 Mitochondrial import receptor subunit TOM40 homolog 1 | 1358 | 5e-149 |
| Q9SX55 Putative mitochondrial import receptor subunit TOM40 homolog 2 | 1048 | 5e-113 |
| Q9U4L6 Mitochondrial import receptor subunit TOM40 homolog 1 | 268 | 1e-022 |
| Q9CZR3 Mitochondrial import receptor subunit TOM40B | 254 | 6e-021 |
| A4F267 Mitochondrial import receptor subunit TOM40B | 253 | 7e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RGH8 Mitochondrial import receptor subunit tom40, putative | 1219 | 1e-131 |
| A5ASV4 Putative uncharacterized protein | 1193 | 1e-128 |
| B9HG93 Predicted protein (Fragment) | 1175 | 1e-126 |
| B9IBJ6 Predicted protein | 1175 | 1e-126 |
| A2XG58 Putative uncharacterized protein | 1149 | 2e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20000.1 TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel | 1359 | 4e-150 |
| AT1G50400.1 porin family protein | 1048 | 4e-114 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
