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Information for unigene UN23092

FASTA Sequence
Unigene ID: UN23092Length: 1255  SNP
TTTTTCTCTCTCTCCGTCTCCGACGATGGCTACCGGTGACCAGAGCAAGAAGAGAAAGCAGCGTTATCTCCCTCAGAATAGACCAG
CTAAGAAGAAGGGAGCATACCCTTTGAAGCCAGGTGTGCAAGGTTTCTTCATCTCGTGCGATGGCGGACGCGAATACCAAGCTTCT
CAGGAAGCTATTAACGTCATTGATTCCTTTTTTGAGGAGCTAATACATGGGACTGGCTTGAAAATGAATTCTTCTGGGGTGCTCGA
GAACCCAATTAACAAAAAGGTTACGTTTTCCTATAGCGAGGATGAGGATGAAGAGGAAGAGGAAGATGATGATGATGACAAGGAAG
AGGAAAACAAAGAGGAGGCTGGTGGGGATAAGGAAGAAGTGAAAGAAGGCGGTAATGATCAAGTGGTTGAGACTGAGAAAGAATTA
GCAAGCCAAGAAGGTTCATGTGATGTCAAACAGTTAGCAGAAACTGAGACTGAAAAGGAAGAAGAGAAACAAAAGAATATTGTTGA
AGAACCTCCAAAAAAGAAGCCATGTGTGGAAGAAGCATCAGCAAAAGTAAACGGAAATGCTGCAGAGAAGTCCATTGATAAGCTTA
TTGATGCTGAACTAAAAGAGCTTGGTGACAAGAGCAAGAGACGGTTTATGAAGTTAGATCCTGGTTGCAACGGTATTGTCTTCATC
CAAATGAAAAGGAGAGATGGTGATCCAAGTCCCAAAGACATTGTACAGCATGCAATGACTTCTGCTGCTGCAACAAAAAAACATAT
GTCAAGGTTCATCCTAAGAATTTTACCAATTGAAGTGGCGTGTTACCCTTCGGAGGAAGAGATTTCAAGAGCCATCAAGCCTCTTG
TAGAACAGTATTTTCCCGTTGAGACTGATAACCCCCGGAAATTTGCTGTGTTGTATGGAGCACGTGCAAACACAGGCCTTGATAGG
ATGAAAATAATAAACACGGTTGCTAAATCTGTTCCTGCCCCTCACAAAGTTGATTTGAACAACCCGGAGATGTCTATCGTGGTTGA
AATTGTTAAGACAGTGTGCTTAATTGGGGTGGTGGAGAAGTACAAGGAGCTGGCAAAGTACAATCTCAGGCAGCTCACGTCAACCA
AGTGATGCAACTTTTACTATGTTTTGTTTCTCAAGACTAAGATGCTATGTGTTTTTTTACTGGTAGTGTCATAAGACTCTTCTGAT
TTAAACTTTTTCAAATGGTTGAAGTTTGTCTTTGGATCCTACATTGTCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873569 THUMP domain-containing protein [Arabidopsis lyrata subsp. lyrata]15085e-165
NP_568274 THUMP domain-containing protein [Arabidopsis thaliana]14808e-162
XP_002313361 predicted protein [Populus trichocarpa]11716e-126
XP_002298299 predicted protein [Populus trichocarpa]11456e-123
NP_001068115 Os11g0568600 [Oryza sativa Japonica Group]9621e-101

Swiss-Prot top hits (Blast detail)Scoree value
O94317 Uncharacterized serine-rich protein C215.131604e-010
Q7M732 Retrotransposon-like protein 11481e-008
Q75JC9 Uncharacterized protein DDB_G02716701462e-008

TrEMBL top hits (Blast detail)Scoree value
Q94CK1 At5g1241014806e-162
B9HP06 Predicted protein11714e-126
B9GI37 Predicted protein11454e-123
Q2R2E7 Os11g0568600 protein9627e-102
B8BL44 Putative uncharacterized protein9591e-101

Arabidopsis top hits (Blast detail)Scoree value
AT5G12410.1 THUMP domain-containing protein14812e-164
AT4G33740.1 unknown protein1211e-006
AT4G33740.2 unknown protein1211e-006
AT4G33740.3 unknown protein1211e-006
AT5G03710.1 unknown protein1192e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  10%
 
127  35%
 
83  15%
 
112  10%
 
93  15%
 
63  15%

Unigene MembersMember information