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Information for unigene UN23110
| FASTA Sequence |
| Unigene ID: UN23110 | Length: 1866 |
SSR | SNP | CGGCACGAGGATTCTCTTTCTCTCTCTCTCTAATAAACAGAGAGAAGAAATCAAATGGCTCTTTCCAACGCCGCCTCCTCCTCTCT
CTCCACCAGATCTCTCTACACCGGTCTATCTCACCGTCACAGCAACCGTCAATCCTCCATCCCTTTCCATCACGCCGTCACCAAGC
CTAACTCCTCCGTCAAACTCGTCGCGGCCCTCCACGCGTCGGATCCATCCCGAAACGCCGCCGTTTCGGTCAAGGAATCCACCGTC
TCTCCTTCTCCTCGCGCCGCGTTGAAATGGACGCCGGAGAGCTGGAAGCTGAAGAAAGCTCTCCAGCTCCCTGATTACCCCAACGC
CGACGAGCTCGAGTCCGTCCTCAAGACCATCGAGGCTTTCCCTCCGATCGTCTTCGCCGGAGAAGCCAGGAACTTGGAAGAGAGGC
TGGCGGATGCCGCCGTCCGGAAAGGCGTTTTCTCCTCCAGGGAGGGGATTGTGCAGAGAGTTTCAAGGAGTTCAATGCCGATAACA
TCAGAGACACCTTCAGAGTGTTGCTTCAGATGAGCATTGTTCTTACCTTCGGCGGTCAAGTTCCGGTCATAAAGGTTGGGAGAATG
GCTGGTCAGTTTGCGAAGCCTAGATCTGATCCATTCGAGGAGAAGGATGGTGTTAAGTTGCCTAGCTACAAGGGAGACAACATCAA
CGGCGACACTTTTGATGAGAAGTCTAGAATCCCTGATCCTAACAGGATGATTCGTGCTTACACGCAATCTGCAGCTACGTTGAACC
TTCTTAGAGCCTTTGCCACTGGAGGTTACGCTGCTATTCAAAGAGTTACGCAGTGGAACCTTGATTTCGTTGAGCAAAGCGAGCAA
GCTGACAGGTACCAGGAGCTAGCCAACAGGGTTGATGAGGCCTTGGGGTTCATGTCTGCTTGTGGACTTACCACTGATCATCCACT
TATGACTACAACTGATTTCTACACGTCCCATGAGTGTTTGCTTTTGCCTTATGAGCAGTCTCTCACGAGGCTGGACTCAACTTCTG
GTCTCTACTATGATTGCTCTGCGCACATGGTGTGGTGTGGAGAGCGTACCCGACAATTGGATGGTGCTCATGTCGAGTTTCTCAGG
GGGATTGCTAATCCTCTTGGCATTAAGGTGAGCAACAAAATGGATCCCAATGAGCTTGTAAAGCTTGTGGAAATCCTGAATCCTAA
CAACAAACCTGGAAGAATCACTGTGATTGTTAGAATGGGTGCGGAGAACATGAGAGTTAAGCTTCCTCACCTGATCAGAGCAGTGC
GCAGGTCAGGCCAGATTGTGACATGGGTCTGCGATCCAATGCATGGAAACACCATCAAAGCACCTTGCGGTCTCAAAACAAGAGCC
TTTGACTCTATCCTGGCTGAAGTGAGAGCCTTCCTAGATGTGCACGAGCAAGAAGGAAGCCACGCGGGAGGTATCCATCTAGAGAT
GACAGGACAGAATGTGACAGAGTGCATTGGAGGGTCCCGTACTGTGACTTACGATGACTTGAGCTCTCGCTACCACACACACTGTG
ACCCAAGGCTCAACGCGTCTCAGTCTCTTGAACTGGCCTTCATTGTTGCTGAACGGCTCAGGAAGAGAAGAACCGCTACTCAGCGT
CTATCTTAAGTGCTCCGTCTTTTCTCTCTTTTGTTTTGTGAGTTTGGTGTCTTTATGACCTGCCTCTTTAGGAGGGAGCAAACCTT
GCTTTGAACCCTGTTCCGTTTTGCTGTGCCCCAGACAATCTCACGTCTTTGTTGTTTCAATTTAATGTTTAACTGTATGAATTCTA
CTACTGTAAACTCCTCTTCCTCCTTATTACATACATACAGTATCTACAGACTTTGGAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866901 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 [Arabidopsis lyrata subsp. lyrata] | 2038 | 3e-226 |
| BAJ34341 unnamed protein product [Thellungiella halophila] | 2025 | 9e-225 |
| NP_195708 phospho-2-dehydro-3-deoxyheptonate aldolase 1 [Arabidopsis thaliana] | 2021 | 3e-224 |
| AAA32784 3-deoxy-D-arabino-heptulosonate y-phosphate synthase [Arabidopsis thaliana] | 2010 | 5e-223 |
| XP_002307072 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] | 1892 | 2e-209 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29976 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic | 2021 | 1e-225 |
| P37822 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic | 1873 | 2e-208 |
| P37215 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic | 1851 | 6e-206 |
| P27608 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic | 1820 | 2e-202 |
| P21357 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic | 1804 | 2e-200 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H4R8 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase (Fragment) | 1892 | 2e-209 |
| B9T0A7 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast, putative | 1888 | 5e-209 |
| B9VU85 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase | 1885 | 1e-208 |
| O24046 2-dehydro-3-deoxyphosphoheptonate aldolase (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase) | 1860 | 8e-206 |
| A9PF21 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase | 1851 | 9e-205 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39980.1 DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1); 3-deoxy-7-phosphoheptulonate synthase | 2022 | 7e-227 |
| AT1G22410.1 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative | 1843 | 4e-206 |
| AT4G33510.1 DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase); 3-deoxy-7-phosphoheptulonate synthase | 1798 | 7e-201 |
| AT4G33510.2 DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase); 3-deoxy-7-phosphoheptulonate synthase | 1441 | 2e-159 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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