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Information for unigene UN23117

FASTA Sequence
Unigene ID: UN23117Length: 906 SSRSNP
GGGTTCAAACATCATTTGCAGACTGTCTCTCTCTTTTTTCCTCTCTCATCTGCCTTGTTAAAAAGAAAAAAAAAGAACATGGCTGC
TTTTGAGGGAAGCTCTGATTTGGATGCTATACAGGAGCATCTCTTGGAAGACTTTTTGGTTGCTGATGGTTTCATGGGAGATTTCG
ACTTTAATGCTTCTTTTGTCTCAGGACTCTGGTGTATAGAACCTGTGATGAATCAAGTTCCTAAACAAGAACCCGATTCTCCGGTT
CTTGATCCGGACTCGTTCGTCAAAGAGTTTTTACAAGTGGAAGTGGAATCATCTACATCAACGGGAATTTCAGAGCAGAATTCATC
ACCACATGAGACTGATCAGAGTGTCTCAGCCAGGAAAAAAACAGAGAGGTTCGAAGAACAAGAAGAAGAAGAAGAACAGAGGCACT
ACCGAGGAGTGAGAAGAAGGCCGTGGGGGAAATTTGCAGCAGAGATTCGGGATCCAGCAAAGAAAGGATCTCGGATTTGGCTAGGG
ACGTTTGAAAGTAATGTTGATGCCGCAAGAGCATATGACTGTGCAGCTTTCAAGCTCAGGGGAAGAAAAGCTGTGCTCAACTTCCC
TCTAGACGCTGGCAAATATGAAGCTCCCGTGAATTCAGGACGGAAGAGGAAGAGAAGTGATGTGCAGGAGGAGCTCCAAAGAAGTC
AGAGCAATTCATCTTCATCGTCAAGTGATGGAGGAACGACTTGTGAATGATTAATTTAACATTTAAAAGTGTGTGCAGTTTCATTG
TGCAAGTTAATTGTACAGAAGAAGTGAAGTATAGGTTAGTGTGCTAAGAACTCTTGCAACAAATTTGTATGAATGTTCTGTTTCTT
AAGTTCTTGTTTCCAAGACAGTTTTCTCGTGAGGGATTGAGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAR15436 AP2 transcription factor [Sisymbrium irio]10145e-108
AAR13699 AP2 transcription factor/ethylene response element [Brassica oleracea]9805e-104
NP_196375 ERF/AP2 transcription factor [Arabidopsis thaliana]8542e-089
AAR15499 AP2 transcription factor [Arabidopsis arenosa]8471e-088
XP_002871278 AP2 transcription factor [Arabidopsis lyrata subsp. lyrata]8462e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q9LY05 Ethylene-responsive transcription factor ERF1068549e-091
Q9FKG2 Ethylene-responsive transcription factor ERF1076495e-067
O80341 Ethylene-responsive transcription factor 53297e-030
Q8VY90 Ethylene-responsive transcription factor ERF1053153e-028
Q9FKG1 Ethylene-responsive transcription factor ERF1043101e-027

TrEMBL top hits (Blast detail)Scoree value
Q6V5I2 AP2 transcription factor10144e-108
Q6V5J8 AP2 transcription factor/ethylene response element9803e-104
Q6V5B8 AP2 transcription factor8479e-089
Q6V5D3 AP2 transcription factor8451e-088
Q6V5G9 AP2 transcription factor8334e-087

Arabidopsis top hits (Blast detail)Scoree value
AT5G07580.1 DNA binding / transcription factor8548e-092
AT5G61590.1 AP2 domain-containing transcription factor family protein6495e-068
AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription activator/ transcription factor3296e-031
AT5G51190.1 AP2 domain-containing transcription factor, putative3153e-029
AT5G61600.1 ethylene-responsive element-binding family protein3101e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
811  28%
 
126  15%
 
73  8%
 
610  26%
 
112  5%
 
95  13%
 
102  5%

Unigene MembersMember information