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Information for unigene UN23137

FASTA Sequence
Unigene ID: UN23137Length: 1600  SNP
GGGAACTCCGCGTCGAGAAAAAGCTGTCAAATTCAACATTCTCTCTCGTGTTTAGCTTCCGAGAACGAGAATCCGGTGGGAGAGAT
CAGAGGGAGAATCGTCGGCGATCTTGAGCTCTCTAAAAAAACAGAAGCAATGATTGGGTTGTTTAAAGTAAAGGAAAAGCAAAGAG
AACAAGCTCAGAATGCTAGCAGAGGCGGTGGAGCTTCTGTCAAGAAGCAATCTGCTGGCGAACTTCGTCTTCACAAAGATATATCA
GAGTTGAATCTTCCAAGCTCGTGTACGATATCATTTCCTAATGGCAAAGATGATTTGATGAACTTTGAAGTCTCCATTAAACCCGA
TGACGGATACTACCACAATGGTACATTTGTTTTCACGTTCCAAGTGTCTCCTGTGTATCCTCACGAAGCTCCTAAAGTTAAATGCA
AAACCAAGGTTTATCATCCCAATATCGATTTGGAAGGAAACGTCTGCCTCAACATCTTGCGTGAAGACTGGAAACCTGTTCTTAAC
ATCAACACTGTTATCTATGGACTCTTCCATCTTTTCACGGAACCCAACTCTGAAGATCCTTTGAACCATGACGCAGCACAAGTTTT
AAGGGATAACCCAAAGCTGTTTGAGACCAATGTTCGTAGAGCCATGACTGGTGGCTATGTTGGCCAGACCTTTTTCCCGCGCTGCA
TCTAACAAAAGCTCTGGTTCGTTCTTCTTAAAGCAAAAAAAGATAAGAACTGGAACTACCCCACCCTTTATCCGCTCTTGTATCTC
TTATTCTCAGAGGACACACTTGCTTGTTTGTTTGCTTCTGTAATATCACATTCTGCTTAAGCTCTGAGAGTTCGACAAAGGAATTG
TATAACATTCTGTACTATTTGATTAGATCTCGGTATCAATGTTTATACTGTGGTGGTATTTGAAAGAATCAAAACATAAGCTCAAA
CTCAGATCATTTCAATGTCTTTATAACTAGCAGTCTTCGCGTTCTCTCTATCTTTCTTGAAAACGAAATGCAGAGGCGTGTAAGAG
AGACAACATAGACCAAAGGGAACAGCCATCATGGACAAAAGCCCCTTGGAGAGAGCCTCAGCTTCACGCACAGACGAGCTTTTCAA
AGGATCAATACCTTTCGAGTCATACCCAAACATCTTCTCAGACAAGATCCCAACCAAAGGCGCAGCAAATGAGGAGAAAGAACCTT
CGAAAGCCCGGTCGAACGCGTAGATCATCGTCCGGTGCTTAGGAGGAACGACTTCAGCAAACATTGGTGCGTTTACCGCTGAACCG
CACCAGCTTATGGTGAGACCCATCAAGAAGAGAGTGATGGAGAAGATCAAGTAGCTATCTCTGCTCTGTGGGATTGCTTTCAGAAG
GATGATTGAGAATGGGATCCCCATGAAGGCACTGAACTGCGCACACATCACTCTACCTGAGTTTGGATAAATCCGTGACATCTTAT
CAGCGATGATGCCTCCCATCAAGGTTCCTATCGCGCATCCAGTCGCAAACACCCCAAGCAAAGCTGCTGTCTGGTTATGATCAAAC
CCAATAAGCTCAAACCACATTGTGAAGAAAACCATTGCAGTCCAAGTAATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869023 predicted protein [Arabidopsis lyrata subsp. lyrata]10231e-108
NP_195397 major facilitator protein [Arabidopsis thaliana]10221e-108
ACI16426 RUB1-conjugation enzyme [Brassica juncea]9674e-102
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]9575e-101
BAJ33605 unnamed protein product [Thellungiella halophila]9513e-100

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc129572e-102
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8344e-088
A3KN22 NEDD8-conjugating enzyme Ubc125997e-061
P61081 NEDD8-conjugating enzyme Ubc125997e-061
P61082 NEDD8-conjugating enzyme Ubc125997e-061

TrEMBL top hits (Blast detail)Scoree value
O23203 Putative uncharacterized protein AT4g3679010221e-108
B6E0M7 Ubiquitin carrier protein9672e-102
B9SGH9 Ubiquitin carrier protein8769e-092
C6SV99 Ubiquitin carrier protein8652e-090
A9PAZ9 Ubiquitin carrier protein8581e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G36790.1 transporter-related10234e-111
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9581e-103
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9581e-103
AT2G18600.1 RUB1-conjugating enzyme, putative8353e-089
AT2G18590.1 carbohydrate transmembrane transporter/ sugar:hydrogen symporter8084e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  14%
 
114  14%
 
128  28%
 
65  17%
 
203  10%
 
72  7%
 
102  7%
 
181  3%

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