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Information for unigene UN23164
| FASTA Sequence |
| Unigene ID: UN23164 | Length: 2295 |
| SNP | GCTTACGCGATTGCACGTGATCCGGAACTATGGACAGATCCAGATGTGTTTAACCCTGACAGGTTTCTTGATAGTTCTTTAGATTA
CAAGGGATTGAACTTTGAGCTTTTACCGTTTGGGTCTGGTAGGAGAATCTGTCCAGGGATGGCGTTGGGGGTTGCCATTGTTGAAT
TGGGATTGTTGAACTTGCTTTACTTCTTTGATTGGGGGTTGCCTGAGAAGGAAGAAGCCGACAAGATCATCAAAGGAAATGAAATT
GCTCTTGACCTCTTTCAAGTTCTTCACCACTAAAATCTATTTTTTTGTAACAACTTAATATTTGGTATTGAATTTTACATTAAGAA
TCATAGGGTCTACTATCCTTAAATATATAATATGGTTGGAGAAGATGGCGCCATTTCTAATCATGTCTCAAAATGATATTTGATAT
GACATAACTCAAAGGATTAGCTGCTCCAAAACAAGTTTATACGTTTCTCATTAATAGACTAGTAAAAAATCAAAAGATGATTTTAT
TGTAGGATTAGTATTAACTATTAATCATAAAAACTGAGTAAGTAAAATCTAAAATGTTTTCTACATGAAACATGACTCTAGTTTCT
TCTCTTCCGGCAACCTTGGCGTGATGGTCACCTTAAGACCGTACTTCATGTACAAGTTAGTCGTAACTCTCGGGACAACCACATGA
TCTTGAGCAACCTTGATTGAGTACTTCAACAAGACTGAAGCAGCTATCATCTTCATTTGCAAGTAAGCAAATGTTTTCCCTATACA
AAGCCTAGGTCCAGCATTGAACACAACATATTTGAACTGGTCGTCACTGACAAACTTCCCTCCTTGGATCCACCTCTCTGGTCTGA
ACATTTCACAGTCTTTCCCCCATATTGATTCCATCCTTCCCATGGCATAGATAGAGAAGTAAACCCTTGAACCCTTTTTTATAAAT
GTCCCATCTGGAAACACATCATCTCCAATGGCTTGTTTCATCTCCATTGGGATTGGTGGGTAAAGTCTTAAGGTTTCTGAAATTGC
TGCTTGAAGATAGACCATGTTGTTTAGTTCTCTGACCGTGAAGAGACTACTGTCTGAAGGATCTCCTCTCTGTTTCATGATTTCTC
TGATCTCGTGGATGATTTTGTTTTCAACTTGTGGGTGTCTTTGTATCACCCAGAAGAACCATGAAAGCGCAACAGAACTTGTGTCA
CGCCCAGCTAAGATGAAACTTGTGCAAAACTGTCTAAAAAACCTAATGGTTGAAGGACCAATCTCGTTACCTTTTTTATGACTCTC
TATCTGAATAATCCTTGTAAGGACGTCAGATCTATTGTCTGACGTCTCATCATCCTTAAGCATGCAGATACGATCCAGTATCATCT
TGTTCACAAAGCCATGCACGACGTCAATAGCGTTTCTTAGACCTTTCTCATACCCTATGTTCAGAAACTTCATTGGTTTCCATATA
AATGGAGGGATCATGAACCTAAACAACGTAGACTCCGTTGCTTCGTCAAAAGCTTTAGCAAATGGAACTTGAGGAAGATCTTGAGC
TAGAGTCTCCGGGTCATCGCCTAGACCCGCGATGCAGATGATGTCAAACGTCAAGCGCAAGAGCACGTCTTGGAGATCAAATGCTT
CTTGTGAACTAGAGAAACTCTCCATCACCTTCAACAGCTTCTTGCTTACTAAACGTTGTGTCGTCTGAAAGGAATGCTCCATGAAC
CGAGTTGAATGCATTTCGGTTATGATGATCCTTCGTTGCTCTTTCCATGACTCATCATCGGCGTTAAAGATACCATCCTCGAGGAG
ATCTTTGAACCGGTCTTTGAAGAAGGTACCTTTGGGGTAGTTCTTGAAGTTGGTCTTTAGCATGTACTCAACATTGGCAGGAGAAC
AAGTCACGGCTCCATAAGATCCATCAAGGCAGAATCCGCGGTAAAGAAACGTGTTTCGGGATTTTTTTAAAGACTTTGTGACCCAT
CCATAGACATCATTTATATGAAGGAAAAACTCTACAGTAATGCCAAACACTGGCCACAGCGTTGGCCCGTGCTTGTTGGTTAACTT
CTCACGCAGGCAACAGAAAACAAACAGCCCTAACAACGCAATAGATACATCTAAGAGAGAAAGGTGATTAAAGACTCGCTCTGTTA
AAGACATTGTAAGGTTCACTCACTGATGAAATCTTTTGTTTGTGGTAGTCTCATTGTTTCAAAAGAGAGTTTAGAATGTCAAATTA
TGTTGGAGGAAAGATGGGTCATGCATTTCATGTTTTGGTTTAGGACTTACATTTGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAK31592 cytochrome P450 [Brassica rapa subsp. pekinensis] | 2509 | 9e-281 |
| XP_002892730 CYP86C4 [Arabidopsis lyrata subsp. lyrata] | 2407 | 6e-269 |
| NP_172774 cytochrome P450, family 86, subfamily C, polypeptide 4 [Arabidopsis thaliana] | 2386 | 2e-266 |
| AAO41955 putative cytochrome P450 [Arabidopsis thaliana] | 2383 | 4e-266 |
| NP_172773 cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana] | 2219 | 4e-247 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMY1 Cytochrome P450 86B1 | 1168 | 1e-126 |
| O23066 Cytochrome P450 86A2 | 966 | 3e-103 |
| P48422 Cytochrome P450 86A1 | 909 | 1e-096 |
| Q50EK3 Cytochrome P450 704C1 | 740 | 5e-077 |
| Q9SAE3 Cytochrome P450 71B28 | 445 | 8e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ARG6 Cytochrome P450 | 2509 | 6e-281 |
| Q9SAE8 F3F19.17 protein | 2386 | 1e-266 |
| Q84WE8 Putative cytochrome P450 | 2383 | 2e-266 |
| Q500V6 At1g13140 | 2219 | 3e-247 |
| B9HTQ1 Cytochrome P450 | 1606 | 3e-176 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13150.1 CYP86C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2387 | 4e-269 |
| AT1G13140.1 CYP86C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2219 | 1e-249 |
| AT1G24540.1 CYP86C1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 1584 | 6e-176 |
| AT3G26125.1 CYP86C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 1406 | 2e-155 |
| AT5G23190.1 CYP86B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 1168 | 1e-127 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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