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Information for unigene UN23203
FASTA Sequence |
Unigene ID: UN23203 | Length: 998 |
SSR | SNP | CACACAATGAAAGTAATAACCATCAGGTCTATTCAATGTCACATGTTTGAAACACTAGAGGCAGATACAAGAGGATGAAATGTTAA
TCCAACTCAATACAAACCGTTTTGCTCTATAGTTTTTAAGAGTCATAACAATAATTTACAGCTGAAAAGAATCAAGAATGGCTTGA
AGAGTCTTCTGCGAGCTCTGCCATTGCTTCTCAGTAGCACTCACCACAAACAGAACCACCGTGTTCCCCTTTGCCGTCGCTTTCGC
AAGGTTATGACTTCCCGTTAGCGCAAATGGCGTCTCCAACACATACTTATAGTACGTTTGATCACCGATCTTTTCGACTGATGTAT
TCACAAGCTCATCAGAATCATAAGAGTTTCCAGTGACAAAGGGACCAAGAGAAGCGATCACTCTCTCAGGCTCACCGAGATCTTCA
ATAGTTGCATTCGGCTTGTTGGTCAGACGAATCAGAGGAGATGCAACTACTTGAACTTTGCCTTGCTTCTCGTTCTCGAACTTCAC
TTCTATCCATGGCTCTGCGCATTTCGGTTGGCAGTAGTTGCCTGACAAGATGTTGGCTATTCTCAGCTGTTTCCAGTTCGGTGGTA
GAACAAACTGATACGGCTGCACGTTTCCTGCGCGGAGAGCAGGAGTATCAGAAGGTTTGGCTTTGAAGAGGACGAAAGAAGGGTCA
GTCTCAGAAGGTGGTAAGAAGGATCCCACTTCCACCTCACGGGCCTCAGAGATAGGAGCTTCCTTCAAGTTCAGAATCGCTGGAAT
AGCCACCGTTGTTTTCAGGAGTAACTCTCTCCTTCTCGGTTGTTGTTGTTGTTGTTGTGAGGATGCAACAATGAAGCTACTAGCTC
TTGTTCTGACTGAAGCTGTGAATGTAGGAGAGACATGGAAGATGTTTGATGTCGGGACGAGAGATGCGGAAGCCATTTTTTTTTTG
GTTATGAGAGGTTGAAAGTTTTCAGGGGTTTGTGAATATCACTTTTGGATCC
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GenBank top hits (Blast detail) | Score | e value |
NP_191224 PsbP domain-containing protein 6 [Arabidopsis thaliana] | 1176 | 1e-126 |
XP_002876377 thylakoid lumenal 20 kDa protein [Arabidopsis lyrata subsp. lyrata] | 1168 | 9e-126 |
XP_002283307 PREDICTED: hypothetical protein [Vitis vinifera] | 943 | 1e-099 |
XP_002307956 predicted protein [Populus trichocarpa] | 942 | 1e-099 |
XP_002526199 Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative [Ricinus communis] | 937 | 5e-099 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LXX5 PsbP domain-containing protein 6, chloroplastic | 1185 | 4e-129 |
TrEMBL top hits (Blast detail) | Score | e value |
B9DH49 AT3G56650 protein | 1176 | 7e-127 |
B9H8R2 Predicted protein | 942 | 1e-099 |
B9SJN0 Thylakoid lumenal 29.8 kDa protein, chloroplast, putative | 937 | 4e-099 |
A2Q6H0 Putative uncharacterized protein | 920 | 4e-097 |
A5BA74 Putative uncharacterized protein | 911 | 4e-096 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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