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Information for unigene UN23290
FASTA Sequence |
Unigene ID: UN23290 | Length: 1550 |
| SNP | GAAATCTAATCTATTCTCTCACATGCCCATCCCCCCCAAACCCAATCCTCTCACTCCTCTCTGTATTATCCAATCATCTCCCATAC
TTTGATGATAACAGTGGAGTCCTACGACGGCGACAACAACGACAGCGAAGACGTTAGGGTTTGATGGCGGTGAAGAAGGCAAGCGA
GATGTTCTCGAAGAGCTTGATCGAGGACGTTCACAGATGGGGATGCATGAAGCAGACGGGTGTGAGCCTCAGGTACATGATGGAGT
TCGGTTCCACTCCCACCGAGAGAAACCTTCTGATCTCCGCCCAGTTTCTTCACAAGGAGCTCCCGATTCGGATCGCCAGGCGCGCG
ATCGAACTCGAGACGCTTCCTTATGGTCTCTCTGAGAAACCTGCCGTTTTGAAGGTGAGGGATTGGTATGTGGAGTCGTTCAGGGA
CATGAGAGCGTTTCCAGAGATCAAGGATACTGCTGATGAGAAAGAGTTCACTCAGATGATTAAGGCTGTTAAAGTAAGGCACAACA
ACGTGGTTCCCATGATGGCTTTGGGTGTTAACCAGCTGAAGAAAGGGATGAGACTCTACGAGAATCTTGATGAGATTCATCAGTTT
CTTGATCGCTTCTACTTGTCTCGAATAGGGATCCGTATGCTTATCGGGCAGCATGTTGAGTTGCATAATCCGAACCCTCCGCTTCA
TACTGTGGGTTACATACACACCAAGATGTCTCCTATGGAGGTAGCAAGGAATGCTAGTGAAGATGCAAGGTCAATTTGTTTCAGAG
AGTATGGTTCTGCTCCGGAGATAAACATATATGGCGATCCAAGTTTCACCTTTCCGTATGTACCAACCCATTTGCATCTTATGGTG
TATGAGCTAGTCAAGAACTCTCTACGTGCTGTCCAAGAGAGGTTTGTTGACTCTGATAGGGTTGCACCACCAATCCGTATCATAGT
TGCTGATGGAATCGAAGATGTTACAATAAAGGTCTCAGATGAAGGTGGAGGTATACCGAGAAGCGGTCTCCCCAAAATATTCACCT
ACCTGTACAGCACAGCGAGAAACCCGCTTGAAGAAGATGTGGACTTGGGAACAGCTGATGTCCCCATAACTATGGCTGGTTATGGT
TATGGTCTTCCTATTAGTCGCTTATATGCTCGCTATTTTGGTGGAGATTTGCAGATCATATCCATGGAAGGATACGGGACTGATGC
TTACTTGCACTTGTCTCGTCTTGGAGACTCGCAAGAGCCTTTGCCATGAGAGTATCATCTCTCAAGTCAGGCTAGTGAAGAAAGGT
TTGAGATATTAATGGTATGGTACGGAAGGGGATCTACTTTACTCAGTTTAATATGCTTCTTTAATGTACATACATTATTTCTCGCA
TTTACGATTTCTTTGATTATAAACTCAGACATGGAGACTTCCCAAGTGAGTTGATCTCATCTGGTTTGATTTGAGCTGATTCAGAA
CTGTTTATCCTTTGTTTGTTGCAACATTTCTCTTGTATCCGCAAGTAAAAAAAAGTTAATTTTATTGGTAAGTTTAAATTTTGTTA
TT
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GenBank top hits (Blast detail) | Score | e value |
ABA25867 mitochondrial pyruvate dehydrogenase kinase [Brassica napus] | 1887 | 7e-209 |
XP_002884588 hypothetical protein ARALYDRAFT_896779 [Arabidopsis lyrata subsp. lyrata] | 1823 | 2e-201 |
NP_187300 pyruvate dehydrogenase kinase [Arabidopsis thaliana] | 1812 | 4e-200 |
CAA07447 pyruvate dehydrogenase kinase [Arabidopsis thaliana] | 1787 | 3e-197 |
XP_002314330 predicted protein [Populus trichocarpa] | 1661 | 1e-182 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P91622 [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial | 619 | 3e-063 |
Q9P6P9 [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial | 606 | 1e-061 |
Q15119 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial | 604 | 2e-061 |
Q64536 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial | 603 | 2e-061 |
Q9JK42 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial | 602 | 3e-061 |
TrEMBL top hits (Blast detail) | Score | e value |
Q3LTL2 Mitochondrial pyruvate dehydrogenase kinase | 1887 | 5e-209 |
Q9SBJ1 Putative pyruvate dehydrogenase kinase | 1812 | 2e-200 |
O82657 Pyruvate dehydrogenase kinase | 1792 | 5e-198 |
B9HXA2 Predicted protein | 1661 | 8e-183 |
A8I354 Mitochondrial pyruvate dehydrogenase kinase isoform 1 | 1640 | 2e-180 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G06483.1 PDK (PYRUVATE DEHYDROGENASE KINASE); ATP binding / histidine phosphotransfer kinase/ pyruvate dehydrogenase (acetyl-transferring) kinase | 1813 | 1e-202 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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