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Information for unigene UN23369
| FASTA Sequence |
| Unigene ID: UN23369 | Length: 1450 |
| SNP | GGGATTGAAGGAAGCAGAGAGATCCATCGGAGAAGGAGGAGAGAGAGTCAGATTGAGAGAAAGAATGACTTCGAGGTACTGGGTGG
TGTCTCTACCAGTGAAGGACTCTTCTTCTTCCTCGTTATGGGATCGCTTACAGGAGCAGATCTCCAAGCATTCCTTCGATACTCCC
GTTTATCGGTTCAACATTCCTAATCTTCGTGTTGGAACCTTAGATTCTCTACTCGCTCTAGGCGATGATCTGCTCAAGTCGAACAG
CTTCGTGGAGGGAGTTTCTCAGAAGATTAGGAGACAGATCGAGGAGCTGGAGAGGATTTCTGGTGCTGAGAGCAATGCCCTTACAG
TTGATGGAGTTCCTGTTGATTCTTATCTCACCAGGTTTGTCTGGGATGAAGCAAAGTACCCAACTATGTCACCTCTGAAGGAGGTT
GTTGACAATATTCAGTCTCAGGTTGCAAAGATTGAGGATGATCTCAAGGTTCGTGTAGCTGAATATAACAACGTCCGCGGTCAACT
CAATGCCATTAACCGAAAGCAAAGTGGAAGTTTAGCTGTTCGTGACCTATCAAACTTGGTTAAGCCAGAAGATGTTGTCTCGTCAG
AACATCTCGTGACTCTCCTTGCCGTTGTTCCAAAGTATTCTCAAAAAGACTGGCTAGCATGTTATGAGACATTGACCGACTTTGTG
GTTCCCAGGTCGTCAAAGAAATTGTTTGAGGATAATGAGTATGCTCTTTACACTGTCACTCTCTTCACTCGTGTTGCAGACAATTT
CAGGACAAATTCCCGCGAGAAAGGGTTCCAAGTTCGTGATTTTGAACACAGCGTCGAAGCACAAGAGACTCGCAAACAAGAGCTAG
AAAAGTTGGTTCGGGATCAGGAAAGCTTGAGAAACTCTCTGTTGCAGTGGTGCTACACCAGTTATGGAGAGGTTTTCAGCTCCTGG
ATGCATTTCTGTGCTGTTCGTATATTCGCTGAGAGCATTATGAGATATGGTCTACCTCCAGCTTTCTTGGCATGTGTCTTATCTCC
CGCTGTAAAAAGTGAAAAGAAAGTCCGCTCCATTCTTGAACGCTTGTCTGATTCTACCAACAGTTTATACTGGAAAAGCGAGGAGG
ATGGAGGAGCCATGGCTGGTTTAGCCGGTGACTCCGAGACACATCCTTATGTCTCCTTCACGATCAACCTTGCTTAAAAATTGATA
ATGAGAGATGGCTTGATGCTTCTTCTACGTCTATATGCCTTCATCTGTTATATTTGTTTGTGTTCTATATATTTCATTGTTATTAT
ATTTTGATCTTTTTTTTTGTTTCTAAATAAAAGAAGGAAAGATTGAACGTAGCACTCAAGAGAGATGGTACTGTAATTTTTATTTT
GGCCGGAGTCTTGTTAGATTCCGATGGGTTTCTGATACTTGTGGACGAGCAGAGGTTAAACAGTTGTTAAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563916 V-type proton ATPase subunit C [Arabidopsis thaliana] | 1823 | 2e-201 |
| XP_002889973 de-etiolated 3 [Arabidopsis lyrata subsp. lyrata] | 1819 | 5e-201 |
| ABH07428 vacuolar H+-ATPase subunit C [Gossypium hirsutum] | 1648 | 3e-181 |
| XP_002512862 vacuolar ATP synthase subunit C, putative [Ricinus communis] | 1647 | 4e-181 |
| XP_002275510 PREDICTED: hypothetical protein [Vitis vinifera] | 1622 | 3e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SDS7 V-type proton ATPase subunit C | 1823 | 7e-203 |
| Q9SCB9 V-type proton ATPase subunit C | 1154 | 3e-125 |
| Q9U5N1 V-type proton ATPase subunit C | 711 | 6e-074 |
| Q7T385 V-type proton ATPase subunit C 1-A | 706 | 2e-073 |
| P21283 V-type proton ATPase subunit C 1 | 694 | 6e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SUV0 Putative uncharacterized protein At1g12840 (Fragment) | 1823 | 1e-201 |
| Q0PGG3 Vacuolar H+-ATPase subunit C | 1648 | 2e-181 |
| B9RH03 Vacuolar ATP synthase subunit C, putative | 1647 | 3e-181 |
| Q2HUJ7 V-ATPase subunit C | 1580 | 2e-173 |
| C5YX05 Putative uncharacterized protein Sb09g030620 | 1536 | 2e-168 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12840.1 DET3 (DE-ETIOLATED 3); proton-transporting ATPase, rotational mechanism | 1829 | 1e-204 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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