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Information for unigene UN23378

FASTA Sequence
Unigene ID: UN23378Length: 1456  SNP
AGGGTCAAAAAAATATATGACCACGAGTTGGCAGGACAGTTGACCGGGGAACCCAGCTCTACCCGTGGTAGACTAGTAGTTCTACA
AACTTGTTTTTTTTTCTTTGAGATATCAAAGATTAAACAATAGAAGTTCTACAAATGTTTGAAAACAGATGAAAATACTCGGATAG
AATTTTAAGTTAAACATTAACACCACTTCTTAAAAGAAAACAACTTTTCGGAGGACAATCCAACCAGTTTCAGATACTTAGAGACG
CCTCTATTAAGTTCTCATTCTGCTGCTCTCGGCTGCCTTGACTTGCGCGAAATAAGGATGAGCCATTGCTTCTTTTGCAGTTAATC
TGTCTTGATGATCATACCGAAGTAGCTTGTCCAGGAAATCAATCGCCTCAGGTGAGACCAAATGCCTATTGTCAGCATTGATGAAT
TTAGACCAAGGCTTCCTGCTATGTCTCCCAACAAGTGCCTCTAATTGAGCATCAAGTTCTAACTGATACTTATTCAGATATGCATT
CAATTCATCGGTTCCAAGAACCTTGGCAATTTTGACAAGCTGATCCTGGTTGTCATGGCCATAGAAAAAAGGTTCCTTGCGGAATA
TCATCCCAGCAAACATGCAACCAAGGCTCCACATGTCCAAGGAATAGTCATAGTCCTGTAAATCCACTAAAAGTTCGGGTCCCTTG
AAGTATCTTGAGGCCACACGGACGTTATACTCTTTTCCAGGATGATAAAACTCAGCAAGACCCCAATCTATGAGGCGAAGTTTACG
CAGCTCGTGGTCGATCATGACATTGTGTGGCTTGACATCTCTGTGCATTATACCTTGCGAGTGGCAGTAGTCCAAAGCCTTCAAGA
GCTCGTAGATGTAGTAACGGATGTCATAATCAGTCAAAGTAGGATACAGAACCTTAAAGTCTGTGCTGTTAACATACTCAAAAATC
AAGCTTGGGGTTTTTGAGTGTTGGTCTCTGACAACATCAAGCAGCTTCACAATATTTGGGCCTCCACAGAGATTCTGAAGTATCTT
AATCTCTCTTCTAATCTTCTTCTTCTTGACAGGCTTAAGAATCTTGATAACGCACTTCTCGTTGCTGTTCATGTTAATCCCTTCAA
AAACCTCACTGTATTTGCCTCTCCCCACTTTCCTAACTACCTCGTAATCATCTTGCTCCCCCCACTCAACGTTGAGAGACTCGTAA
TCCCAATACTCTTTGGGACGGATCACGTTCACGTCGGTGTAGACACGAGCTTTCGACATCACTGCGGTGGGAAGAGAGATCTCGTC
GAGTGGGTACGGATCGAGGTGAGGATCGAAGCTGCTTCCGTTGGTGACGAGGGTCGACGGTGAGGTAGGAGAAAGCGCCGACGCCG
CACGCGAAGAGATGGAGATGGCGCAGAATAAGAGGAAGCGTAGAAGAAGGAGAGGAGATGGCAAGGGAAAGTAGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190569 casein kinase II, alpha chain 2 [Arabidopsis thaliana]17838e-197
AAK44123 putative casein kinase II, alpha chain 2 CK II [Arabidopsis thaliana]17756e-196
XP_002876010 hypothetical protein ARALYDRAFT_485358 [Arabidopsis lyrata subsp. lyrata]17748e-196
Q08466 RecName: Full=Casein kinase II subunit alpha-2; Short=CK II17416e-192
NP_201539 casein kinase alpha 1 [Arabidopsis thaliana]17407e-192

Swiss-Prot top hits (Blast detail)Scoree value
Q08466 Casein kinase II subunit alpha-217412e-193
Q08467 Casein kinase II subunit alpha-117045e-189
P28523 Casein kinase II subunit alpha16543e-183
O64817 Probable casein kinase II subunit alpha16392e-181
P68399 Casein kinase II subunit alpha13693e-150

TrEMBL top hits (Blast detail)Scoree value
Q8H120 Casein kinase II, alpha chain 2 (CK II)17835e-197
Q8H765 Putative casein kinase II, alpha chain 2 CK II (Fragment)17754e-196
B9DH00 AT5G67380 protein (Fragment)17316e-191
C6TD36 Putative uncharacterized protein17272e-190
Q70Z24 Protein kinase CK2 alpha chain17064e-188

Arabidopsis top hits (Blast detail)Scoree value
AT3G50000.1 CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase17833e-199
AT5G67380.1 CKA1 (CASEIN KINASE ALPHA 1); kinase17403e-194
AT2G23080.1 casein kinase II alpha chain, putative16391e-182
AT2G23070.1 casein kinase II alpha chain, putative15531e-172
AT2G23080.2 casein kinase II alpha chain, putative14581e-161

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
68  42%
 
82  11%
 
74  21%
 
102  11%
 
91  5%
 
181  5%
 
121  5%

Unigene MembersMember information