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Information for unigene UN23378
FASTA Sequence |
Unigene ID: UN23378 | Length: 1456 |
| SNP | AGGGTCAAAAAAATATATGACCACGAGTTGGCAGGACAGTTGACCGGGGAACCCAGCTCTACCCGTGGTAGACTAGTAGTTCTACA
AACTTGTTTTTTTTTCTTTGAGATATCAAAGATTAAACAATAGAAGTTCTACAAATGTTTGAAAACAGATGAAAATACTCGGATAG
AATTTTAAGTTAAACATTAACACCACTTCTTAAAAGAAAACAACTTTTCGGAGGACAATCCAACCAGTTTCAGATACTTAGAGACG
CCTCTATTAAGTTCTCATTCTGCTGCTCTCGGCTGCCTTGACTTGCGCGAAATAAGGATGAGCCATTGCTTCTTTTGCAGTTAATC
TGTCTTGATGATCATACCGAAGTAGCTTGTCCAGGAAATCAATCGCCTCAGGTGAGACCAAATGCCTATTGTCAGCATTGATGAAT
TTAGACCAAGGCTTCCTGCTATGTCTCCCAACAAGTGCCTCTAATTGAGCATCAAGTTCTAACTGATACTTATTCAGATATGCATT
CAATTCATCGGTTCCAAGAACCTTGGCAATTTTGACAAGCTGATCCTGGTTGTCATGGCCATAGAAAAAAGGTTCCTTGCGGAATA
TCATCCCAGCAAACATGCAACCAAGGCTCCACATGTCCAAGGAATAGTCATAGTCCTGTAAATCCACTAAAAGTTCGGGTCCCTTG
AAGTATCTTGAGGCCACACGGACGTTATACTCTTTTCCAGGATGATAAAACTCAGCAAGACCCCAATCTATGAGGCGAAGTTTACG
CAGCTCGTGGTCGATCATGACATTGTGTGGCTTGACATCTCTGTGCATTATACCTTGCGAGTGGCAGTAGTCCAAAGCCTTCAAGA
GCTCGTAGATGTAGTAACGGATGTCATAATCAGTCAAAGTAGGATACAGAACCTTAAAGTCTGTGCTGTTAACATACTCAAAAATC
AAGCTTGGGGTTTTTGAGTGTTGGTCTCTGACAACATCAAGCAGCTTCACAATATTTGGGCCTCCACAGAGATTCTGAAGTATCTT
AATCTCTCTTCTAATCTTCTTCTTCTTGACAGGCTTAAGAATCTTGATAACGCACTTCTCGTTGCTGTTCATGTTAATCCCTTCAA
AAACCTCACTGTATTTGCCTCTCCCCACTTTCCTAACTACCTCGTAATCATCTTGCTCCCCCCACTCAACGTTGAGAGACTCGTAA
TCCCAATACTCTTTGGGACGGATCACGTTCACGTCGGTGTAGACACGAGCTTTCGACATCACTGCGGTGGGAAGAGAGATCTCGTC
GAGTGGGTACGGATCGAGGTGAGGATCGAAGCTGCTTCCGTTGGTGACGAGGGTCGACGGTGAGGTAGGAGAAAGCGCCGACGCCG
CACGCGAAGAGATGGAGATGGCGCAGAATAAGAGGAAGCGTAGAAGAAGGAGAGGAGATGGCAAGGGAAAGTAGGAGTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_190569 casein kinase II, alpha chain 2 [Arabidopsis thaliana] | 1783 | 8e-197 |
AAK44123 putative casein kinase II, alpha chain 2 CK II [Arabidopsis thaliana] | 1775 | 6e-196 |
XP_002876010 hypothetical protein ARALYDRAFT_485358 [Arabidopsis lyrata subsp. lyrata] | 1774 | 8e-196 |
Q08466 RecName: Full=Casein kinase II subunit alpha-2; Short=CK II | 1741 | 6e-192 |
NP_201539 casein kinase alpha 1 [Arabidopsis thaliana] | 1740 | 7e-192 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q08466 Casein kinase II subunit alpha-2 | 1741 | 2e-193 |
Q08467 Casein kinase II subunit alpha-1 | 1704 | 5e-189 |
P28523 Casein kinase II subunit alpha | 1654 | 3e-183 |
O64817 Probable casein kinase II subunit alpha | 1639 | 2e-181 |
P68399 Casein kinase II subunit alpha | 1369 | 3e-150 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8H120 Casein kinase II, alpha chain 2 (CK II) | 1783 | 5e-197 |
Q8H765 Putative casein kinase II, alpha chain 2 CK II (Fragment) | 1775 | 4e-196 |
B9DH00 AT5G67380 protein (Fragment) | 1731 | 6e-191 |
C6TD36 Putative uncharacterized protein | 1727 | 2e-190 |
Q70Z24 Protein kinase CK2 alpha chain | 1706 | 4e-188 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G50000.1 CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase | 1783 | 3e-199 |
AT5G67380.1 CKA1 (CASEIN KINASE ALPHA 1); kinase | 1740 | 3e-194 |
AT2G23080.1 casein kinase II alpha chain, putative | 1639 | 1e-182 |
AT2G23070.1 casein kinase II alpha chain, putative | 1553 | 1e-172 |
AT2G23080.2 casein kinase II alpha chain, putative | 1458 | 1e-161 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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