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Information for unigene UN23413

FASTA Sequence
Unigene ID: UN23413Length: 1785  SNP
TGTTCAAATAGTATTTATGATGATCAGTAATGTACATTTAGTTGACCAAAAAAGAAAAAAACAGTAATGTACATGTTGTATAATAT
GCTGTAGTAACTGCACAATTCAATTATTGTAGTTGTCCAGCTCTGTCTCTATCTTCAAAGCAGAGCCAAGAGAGACGAACAATCTT
ACTTGTCTTGAAAACTCAGGATAAAATCAAGAAGAAGCTTTCAGGTTCTTTTCACCAGTGAGATTCCATAAGGATCACCACCCCAT
TCTTCAAACACAACTATAACGTTCTGAGACTTGAGCCATGAACGTGGTACATGGTACCATCTTTGAGAAGCTTCACCACAATTACT
CAAGCATTTCTTTGCGTCGAATGTTCCAGCGTAGTTGCAACGTCCACAGTTTCCTTGAGCTTTATAAGCAGGCCAATGACGTCCAA
TGTTTCTACCGTTTATCCAAACTAGACCTTTTCCCATAGTGTTCATGTCTATGGCCAACGGTTCGTTTCCTGCTGGTGCGGCAAAA
ATAGACTTGTACCAGGTCAATGGTTGCTTCTTGACCACGTATGATCCTTGATTCCATCTCACAGAGGAACTGTCCGTATGAAGACT
CATAGCTTCACCCTTCACACCAATCTTATAGGACCATTTCCATTTCGACATGTCCCATGTTCCCGAGTTAACTCCCTTCAGTGTGA
CCGGTCCAAGAACCCCTTTATTCCACGTCTCAAAGTGTTGACCAACATTCGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTG
TTGACACCTGCGTGTAGTTTGATCTTCTGGCTAAAGGTTAGTTTTGGGTGAGAAAGTCCTCCATAAGCACTTCCTGCAAGCTGGCC
ATTTACAAACACATGAAGAGCATGTCCAGCTGACCAAATGGTAAGAAGAGGAAAATCACCAGTCTTCAAAAACCTCTCACCAGCAC
CAATTGTGATGTCTGTTAGATACCAGAAATAGTCAGACTTGTCCCAAGTCATGCTTATCTGTTCCACAAGCCCGTTTCTTGCAAAC
GTACCAGCTTCATTTGCAGAAGGAGACGCTTCATTGAACGATTCCCAAGAGAATCTTGTACCTGTTGGAACCATATTCCTGTGTAT
TCTTGGTGCATTAACCTTTGCGGTGTTATAATATTCTGTTTTGCAATCAGGTAAAATACTGACTGACCAAGGAGGCAAATCATATG
GGAATCCACGGAACATAACTCTCGCTGCAGAGTTTGCATCGTTGTTCGATAAAAACGCAGCACAATGTGATTTAGACCAGAACACA
TGAGCCTCTTGTTTAGCTCCAAGATATGTGACGGTTGCATCAGCAGAAACCAAAGCTGGCTCGCTGAGCTTGATGACTTTATGTAA
TGCTTTTAAGTGACTATACTTTGGTTCTCTTGTTAAGCCGTATTCATCTAGAGGAGCGTCGTAGTCATAGCTTGATGCCATGAACT
CACCAGCTGTTCTGTCGAAATTCGTCCCTCCATGATACATATAGTAATTGACAAAGGAACCTCCGTTTTGTATGAATCTTGCAACT
GAGTATGCAATATCTTCAACTGGTCTATACGGTACAGCCCCTCCAAACTCTGTATACCAACCAGTCCAGTTCTCTGTCCACATCTT
TGGCTTGTTGTTTGAGTTCGGTTTGAAATTCTCACAGTAATAACCATTGCACGTGTCTATAATAGGAGAAGGAGCATCCTCTTGCT
TGCACATAATCCATGGAACACCTGTTGAGAGTCCTAATGCCATTTGAGCTACCCATTTCGTGTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864484 predicted protein [Arabidopsis lyrata subsp. lyrata]26531e-297
NP_200498 beta-galactosidase 4 [Arabidopsis thaliana]26243e-294
AAK96780 beta-galactosidase [Arabidopsis thaliana]26234e-294
BAH20357 AT5G56870 [Arabidopsis thaliana]26225e-294
XP_002876169 AT3g52840/F8J2_10 [Arabidopsis lyrata subsp. lyrata]23376e-261

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCV8 Beta-galactosidase 426241e-295
Q9LFA6 Beta-galactosidase 223231e-260
Q9SCV0 Beta-galactosidase 1222933e-257
P48981 Beta-galactosidase20111e-224
P48980 Beta-galactosidase19143e-213

TrEMBL top hits (Blast detail)Scoree value
B9DHZ0 Beta-galactosidase (Fragment)26223e-294
B2MWR2 Beta-galactosidase20946e-233
Q9ZP30 Beta-galactosidase20946e-233
B9HDL7 Beta-galactosidase20337e-226
B0FZE9 Beta-galactosidase (Fragment)20212e-224

Arabidopsis top hits (Blast detail)Scoree value
AT5G56870.1 BGAL4 (beta-galactosidase 4); beta-galactosidase26258e-297
AT3G52840.1 BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding23336e-263
AT4G26140.1 BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding22933e-258
AT3G13750.1 BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding18722e-209
AT4G26140.2 BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds18498e-207

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  19%
 
182  10%
 
215  24%
 
202  10%
 
72  10%
 
94  19%
 
81  5%
 
61  5%

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