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Information for unigene UN23415

FASTA Sequence
Unigene ID: UN23415Length: 1408  SNP
GGACATCATCTCATAAACGAAAAACCACATTGTCCGAGATTTAATTGTTTCTCACTACAACCTTCTTGTCATTTTTTTCTGTAACC
ATGAGTCTTCTGACCGATCTCATTAACCTTGACCTCTCAGACAACACTGAGAAAATCATCGCTGAATACATATGGGTTGGTGGTTC
AGGAATGGACATGAGAAGCAAAGCTAGGACTCTCTCTGGACCTGTGACCGATCCATCACAACTCCCAAAGTGGAATTATGATGGTT
CAAGCACTGGCCAAGCTCCTGGTGAAGACAGTGAAGTGATCTTATACCCTCAAGCGATTTTCAAGGATCCGTTCCGTAGAGGCAAC
CACATTCTTGTCATGTGTGATACTTACACCCCTGCGGGTGAACCAATTCCTACGAACAAGAGACATGCTGCTGCTCAGATCTTTAG
CCACCCTGATGTTGTAGCTGAAGTGCCATGGTATGGAATTGAACAAGAGTACACTCTCTTGCAGAAGGATGTGAAGTGGCCTGTTG
GATGGCCCATTGGTGGCTTCCCTGGCCCTCAGGGACCATACTACTGCAGTGTTGGAGCTGACAAATCTTTTGGAAGAGACATTGTT
GATGCTCACTACAAGGCTTGTTTGTATGCCGGAATTAACATCAGTGGGATCAATGGAGAAGTCATGCCTGGTCAGTGGGAGTTCCA
AGTCGGACCATCGGTTGGTATCTCAGCCGCTGATGAAGTGTGGATCGCTCGTTACATTTTGGAGAGGATCACAGAGATTGCTGGTG
TGGTTGTATCTTTTGACCCAAAACCAATTCCTGGTGACTGGAACGGAGCTGGTGCTCACACCAACTACAGTACTAAGTCGATGAGG
GAGGAAGGAGGATACGAGATAATCAAGAAGGCAATCGATAAGCTCGGACTGAGACACAAGGAGCACATTTCTGCTTATGGTGAAGG
CAACGAGCGCCGTCTCACCGGACACCATGAAACTGCTGACATCAACACTTTCAAATGGGGTGTTGCAAACCGTGGAGCATCAATCC
GAGTAGGACGTGACACGGAGAAGGAAGGGAAAGGATACTTTGAGGATAGGAGGCCAGCTTCCAACATGGACCCTTACATTGTTACT
TCCATGGTTGCAGAGACTACTATCCTTTGGAATCCTTGAAGAAATATGCCAATAATATAACTTGAATCTTTTGGGGTTTCAAGTTT
GTGTTTTCTATAATTATTTAAGCAATTACCGGGTTGATGTTACCGGGGTTTGTGGTTTGGGGCCTTTCTTTTAATCTCTTTGTGTT
TTGGGGTTTGTGATTGGAGCAAAACCTGATTTGCTCTGTTTCTTTGACCTTTTATTTGACCCCTTAAAATTTGTATTAATAAGACG
ATCTGAAAAGGCCTTTTCATGTTTCAATCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA04995 glutamine synthetase [Raphanus sativus]19262e-213
CAA73063 cytosolic glutamine synthetase [Brassica napus]18941e-209
ACF42116 cytosolic glutamine synthetase [Brassica oleracea var. italica]18868e-209
CAA54151 glutamine [Brassica napus]18851e-208
ACD13217 glutamine synthetase [Brassica rapa subsp. chinensis]18841e-208

Swiss-Prot top hits (Blast detail)Scoree value
Q8LCE1 Glutamine synthetase cytosolic isozyme 1-218416e-205
Q56WN1 Glutamine synthetase cytosolic isozyme 1-118391e-204
Q42899 Glutamine synthetase cytosolic isozyme17923e-199
P04078 Glutamine synthetase cytosolic isozyme17781e-197
P51119 Glutamine synthetase cytosolic isozyme 217628e-196

TrEMBL top hits (Blast detail)Scoree value
O24334 Glutamine synthetase19261e-213
B5A7Q7 Glutamine synthetase18947e-210
O04852 Glutamine synthetase18947e-210
B5A7Q8 Glutamine synthetase18866e-209
Q3L0U0 Glutamine synthetase18857e-209

Arabidopsis top hits (Blast detail)Scoree value
AT1G66200.1 ATGSR2; copper ion binding / glutamate-ammonia ligase18424e-206
AT5G37600.1 ATGSR1; copper ion binding / glutamate-ammonia ligase18407e-206
AT5G16570.1 GLN1;4; glutamate-ammonia ligase17492e-195
AT3G17820.1 ATGSKB6; copper ion binding / glutamate-ammonia ligase16848e-188
AT1G48470.1 GLN1;5 (glutamine synthetase 1;5); glutamate-ammonia ligase15924e-177

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
713  28%
 
810  22%
 
65  11%
 
93  7%
 
102  4%
 
181  2%
 
194  9%
 
212  4%
 
204  9%
 
121  2%
 
111  2%

Unigene MembersMember information