|
Information for unigene UN23430
FASTA Sequence |
Unigene ID: UN23430 | Length: 797 |
| SNP | GGCATTCATATCAAACAGCCAACCAAAACTAAACATCTCTCTCTCCACCACTCAAATTTCTCTCTCGCTACTTTCAATGGCTTCCT
TGCTCGATTCAGTCACCGTTACCCGCGTGTTTTCTCTCCCGATCACTTCCTCGATTTCGTCTGCTTCAAAGGCTCCGTCAGTTTCC
GCTCTGCGGATTCCGGAATTCAGAGGTTTGAAAGCTTCCCGACGGAGTTCGGTGACTCAGTCAGCTAGCTTTGGTACGAATCTCGG
ATCCCGATTTGCTCGTGGTGGTAGAATCGTCTGCGAGGCTCAGGACGCCACTGCCGCAGCCGTGGAAGTGCCAAACATCTCTGATT
CAGAATGGCAAACACAGGTTCTCGAGTCAGACGTACCAGTATTGGTCGAGTTTTGGGCACCATGGTGTGGACCTTGCCGTATGATT
CACCCCATTGTTGACCAACTGGCCAAAGATTTCGCAGGCAAGTTCAAATTCTACAAAATCAACACCGACGAGTGCCCAAACACAGC
CAACCGTTACGGTATACGCAGCGTTCCCACGGTGATCATATTCAAAGACGGTGAGAAGAAAGATAGTATCATCGGAGCTGTCCCTA
AAGAGACGTTGGAGAAAACTATAGAAAGATTCGTGGTCGAGTAACTAAACAAAACAAAAAAAAAACAAATTTCACTCATGTCTTCT
GTGTTGTATAATTCTTCATAAGGTCTCTTTTGACTATTTATGTTTCCATTTGCACACTTGTCTTGTTTAGTATTATAAAAAAAAAA
GAATAACGAACAATAATTACTCC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
NP_188155 thioredoxin M4 [Arabidopsis thaliana] | 812 | 1e-084 |
AAF15951 thioredoxin m4 [Arabidopsis thaliana] | 807 | 4e-084 |
XP_002882937 hypothetical protein ARALYDRAFT_897824 [Arabidopsis lyrata subsp. lyrata] | 802 | 2e-083 |
BAE99119 thioredoxin m4 [Arabidopsis thaliana] | 754 | 6e-078 |
ABK96292 unknown [Populus trichocarpa x Populus deltoides] | 530 | 6e-052 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SEU6 Thioredoxin M4, chloroplastic | 812 | 5e-086 |
P07591 Thioredoxin M-type, chloroplastic | 420 | 2e-040 |
Q7X8R5 Thioredoxin M2, chloroplastic | 414 | 7e-040 |
Q9XGS0 Thioredoxin M-type, chloroplastic | 414 | 7e-040 |
Q9SEU8 Thioredoxin M2, chloroplastic | 409 | 3e-039 |
TrEMBL top hits (Blast detail) | Score | e value |
A9PIT9 Putative uncharacterized protein | 530 | 4e-052 |
B9HZV8 Thioredoxin m | 515 | 2e-050 |
Q95AH9 Putative thioredoxin m2 | 500 | 1e-048 |
A7LNX7 Thioredoxin | 487 | 4e-047 |
B9S2L1 Thioredoxin m(Mitochondrial)-type, putative | 487 | 4e-047 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G15360.1 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator | 813 | 4e-087 |
AT4G03520.1 ATHM2; enzyme activator | 409 | 3e-040 |
AT1G03680.1 ATHM1; enzyme activator | 405 | 8e-040 |
AT2G15570.2 thioredoxin M-type 3, chloroplast (TRX-M3) | 286 | 5e-026 |
AT2G15570.1 thioredoxin M-type 3, chloroplast (TRX-M3) | 282 | 1e-025 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|