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Information for unigene UN23432
| FASTA Sequence |
| Unigene ID: UN23432 | Length: 1191 |
| SNP | GGAATCTCCATTGGATTGCTCTGAGTCCCCTCTGTTTGTTGTATTTGGTCTTTTGTTTGTTCCAATTTTTAGGCATGATGTTTAGC
TTATTTTTGTTGCTGAAGTCCTTTGTGTGGCTGCTGGGTCTTTGGTCCGTTTATCTGTTGATTTTGGTTGTTCCATCATAGTAAAA
TGAAATATTATTGATGACATTCGACGTTTAGTGACTCACTTTTTTATCTTACTCTCTTTGACTTTTTTTTTTGTTTATGTTATTAT
TATTTTTTTAAAGAGTTTAAGTACTAAACTTCCTATTAAATCTAGTTGGTAGAAGAAGCAGAAGCGAGATCTGAGACTAGCTACAT
CGAAGAAGAAGAAGATGAAGCGTGAGTTTGCGACAACGCTCTTACTCTCGACTCTCTTTACCTTTCTGGTGCCGGAGCTGATTCCG
GTATGCGAAGCCGTGTGGCTCACCATTCCCAAGACCGGAACAAAGTGCGTGTCGGAGGAAATCCAGAGCAAGGTCGTCGTTTTGGC
CGATTACCTCGTCATCTCCGACGAACATTCCATCTTCCCTACTGTTTCTCTCAAGGTTACATCACCATATGGCAGCGTTTTGCACC
ACAGCGAAAATGCTACGCATGGTCAGTTTGCGTTTACAACCCAGGAATCAGGAACCTACTTGGCCTGTTTTGAGGCCGTAGGGAAT
AGTCACGGTAACAAGGATATCAGCATCAACCTTGACTGGAAAACTGGAATCGCGGCCAAGGATTGGGACTCCATTGCTAGGAAAGA
GAAGATCGAGGGTGTGGAGCTTGAGCTTAGGAAACTCGAAGGTTCAGTTGAGGCCATACATGAAAACCTACTTTACCTCCGAAACA
GAGAAGCAGACATGAGGATTGTGAGTGAAAAAACAAACTCGCGAGTCGCGTGGTACAGTATAATGTCACTAGGCATCTGCATTGTG
GTCTCTGGTTTACAGATTTTGTACTTGAAGCAATACTTTGAAAAGAAGAAGCTTATTTAGATGAGAGTGATCCATGGGTACTTGAG
ACACCAACAGACTGTTCAGTTTCCTTTGCTTTTGTTTCTTGTAACACTGTTTCGTTTTCTTGTAACACTCTGTTTCGAACCTGTTA
GTATACAAATTTTGTTCACTTATTTAACTTGTAATCTGTCTCTGGTTAGATTATATTTATATACCTAGACTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891999 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata] | 923 | 3e-097 |
| NP_176075 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] | 915 | 3e-096 |
| NP_172429 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] | 878 | 5e-092 |
| XP_002889759 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata] | 851 | 7e-089 |
| XP_002272994 PREDICTED: hypothetical protein [Vitis vinifera] | 774 | 6e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49755 Transmembrane emp24 domain-containing protein 10 | 313 | 7e-028 |
| Q5RE32 Transmembrane emp24 domain-containing protein 10 | 311 | 1e-027 |
| Q5E971 Transmembrane emp24 domain-containing protein 10 | 310 | 2e-027 |
| Q63584 Transmembrane emp24 domain-containing protein 10 | 310 | 2e-027 |
| Q28735 Transmembrane emp24 domain-containing protein 10 | 309 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FVU0 Integral membrane protein, putative | 915 | 2e-096 |
| Q6IDL4 At1g09580 | 878 | 3e-092 |
| A5AQJ6 Putative uncharacterized protein | 773 | 5e-080 |
| B9SZK9 Transmembrane emp24 domain-containing protein 10, putative | 764 | 6e-079 |
| C6SW61 Putative uncharacterized protein | 744 | 1e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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