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Information for unigene UN23441
| FASTA Sequence |
| Unigene ID: UN23441 | Length: 1579 |
| SNP | GGGAACATATTCTATGATATAGCTACCGAACTTCTTTTTCCTATAAAATAAATAGGTGGGTAGGGCAAAAGAGAAGAGCCTCCTCA
TATCACCCAATTGTTGTTATACCCAAAGAAGAAGCAAAAACCATTTGTCACTGATTGTTTCAGAAAGAGAGATGGAGAGAGCAACC
ACCATTTCTCCGAGCCTGAGTCAAAACTACCTACTTTGTCCTTCACGCGCCTTCACCACGCGCATCCACTCCTTCTCTGCTTCTCG
GAGCTTATCGCCATCATCTTCCTCCTCCTCCATCAAGGTTCAGCATTCCTCCTCTTCTGTATCTTCCTGTTTCATCAATGGCGGAA
CCTCCCTTACTCGTTGCAACGCCGTCCTCTCCAATTCGTCTTCCAGTAGCTGAGAGGTAGCAGACATAGATTGGGACAACATCGGG
TTCGGTCTGAAACCGACTGATTACATGTACGTCATGAAATGCAACCTTAACGGTGAGTTCTCAAAGGGTGAATTGCAGCGTTTTGG
GAACATCGAAGTCAGCCCCTCTGCTGGTGTCCTCAACTATGGACAGGGATTGTTCGAAGGGATGAAAGCTTACAGAAAGCAAGACG
GCAAGAACATCCTCCTCTTTCGTCCTCAAGAGAATGCAACGCGTATGAGAAATGGTGCCGAGAGGATGTGTATGCCTGCTCCTTCC
GTTGATCAGTTTGTCCAAGCTGTGAAAGCAACCGTGTTAGCTAACAAACGTTGGGTTCCACCTGCAGGTAAAGGTTCTTTGTATAT
TAGACCGTTGCTAATGGGAACTGGAGCTGTTCTTGGTCTTGCCCCTGCCCCAGAATATACTTTCCTTGTCTATGTTTCTCCTGTTG
GAAACTACTTCAAGGAAGGTGTGGCACCAATCAATTTGATTGTGGAAAGTGAATTTCACCGTGCAACACCTGGTGGTACTGGAGGT
GTTAAGACCATTGGCAATTACGCTGCAGTACTAAAAGCACAGTCGATTGCGAAATCTAAAGGATATTCTGATGTTTTGTACCTTGA
TTGCGTTTACAAAAGATATCTTGAAGAGGTCTCCTCTTGCAATATCTTCATTGTTAAGGACAATGTGATATCTACTCCTGAAATAA
AAGGAACCATTTTACCTGGGATTACGCGGAAAAGCATAATCGATGTGGCTCGTACCCAAGGGTTTAAGGTGGAGGAACGGGATGTG
ACAGTGGACGAGTTACTAGAAGCAGATGAAGTTTTCTGCACAGGAACCGCCGTGGTTGTCTCTCCAGTTGGAAGCATTACACACAA
AGGCAAAAGAGTATCTTATGGAGAAGGTAGCTTTGGACCTGTCTCGGAGAAACTCTACACCGTTCTGACAAGCTTACAGATGGGTC
TGAGCGAGGACAACATGAACTGGACTGTGAATCTGAGTTAGATAAAACCTCTACACCGGTGTTTACGGTTTTATTTTTTTGTTCTC
ATATAAGTCTGTGATTCTTGTTCGTGAAACTACAAGTTCGATTGTTTTAAAAAACTTTGTTCGATCTTAAAAGTTGACATCTTACA
GGTCTGCTTAAAGATCAGTAGATGTTGGTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875990 ATBCAT-3 [Arabidopsis lyrata subsp. lyrata] | 1887 | 7e-209 |
| ACR10250 branched-chain aminotransferase 3 [Brassica rapa subsp. pekinensis] | 1858 | 2e-205 |
| NP_566923 branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] | 1829 | 4e-202 |
| AAM65160 branched-chain-amino-acid transaminase-like protein [Arabidopsis thaliana] | 1829 | 4e-202 |
| NP_001118802 branched-chain-amino-acid aminotransferase 3 [Arabidopsis thaliana] | 1814 | 2e-200 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M401 Branched-chain-amino-acid aminotransferase 3, chloroplastic | 1829 | 2e-203 |
| Q9FYA6 Branched-chain-amino-acid aminotransferase 5, chloroplastic | 1642 | 8e-182 |
| Q9M439 Branched-chain-amino-acid aminotransferase 2, chloroplastic | 1197 | 3e-130 |
| Q9LPM8 Putative branched-chain-amino-acid aminotransferase 7 | 1038 | 9e-112 |
| Q9LPM9 Branched-chain-amino-acid aminotransferase 6 | 1027 | 2e-110 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C5H9N1 Branched-chain-amino-acid aminotransferase (Fragment) | 1858 | 1e-205 |
| B3H658 Branched-chain-amino-acid aminotransferase | 1814 | 1e-200 |
| Q0WQT2 Branched-chain-amino-acid aminotransferase | 1642 | 1e-180 |
| Q0V7U6 Branched-chain-amino-acid aminotransferase | 1635 | 8e-180 |
| B9SX80 Branched-chain-amino-acid aminotransferase | 1529 | 2e-167 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G49680.1 BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic | 1830 | 1e-204 |
| AT3G49680.2 BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic | 1815 | 6e-203 |
| AT5G65780.1 ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic | 1643 | 5e-183 |
| AT1G10070.1 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic | 1198 | 2e-131 |
| AT1G10070.2 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic | 1198 | 2e-131 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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