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Information for unigene UN23449
| FASTA Sequence |
| Unigene ID: UN23449 | Length: 1083 |
SSR | SNP | TACAGAAAATGCGAAAATTAAACGAGAGAATGGCCTTATTTCGTCCAATAAAAATCCGCCATTTTCAATTTTTTTCTTGTAAGAAC
ATGAACAAGAAACAACACAAACAACTTAAACCAAAACATCAAAAGTTAAAAAACCTAACTCAAACATCACGATTCAACAGGAGACT
CAACTTTGTTTTCCTCAGCTGAAAAAAACGGGATTGGTTTCTTCGGAGCGGGAAGACGCCCGATGCTATCCACCCTATCTTGCTGT
TTAGGAGGTGGTCTCGCTGCTTTTGGCAATAGCCTTCCTTTCTTCTCAAACCATTCCGGTTTAAGCAACGCCCTCAAGCCCAATTT
GTTGTAATACACTCTCCTCACCGATCCTCCTGCCGCTTCCACCACTTCTTTGGCCCTAACCGTCACTCTCGAGACCTCAAAATGAA
GTGGCCATTTGATCTCATCAGCAACCACGACCCATTAGTCTCACTCCGTCTTCTATTTGCTTCCCTATGGCTCCCACATCCTTGAG
CGTCTTCATAGTGATCAACTCGTGTGAATCAATCTCCCCAGCGTTTATGAGTTTAGCGATCTTTCCAAGACCAACCGGCTGGAAAT
GAAGCTTAAACTTGTTCTTGAACCCACGTTTGGGCAAACGACGTCGTAAAGGAGTCTGCCCACCTTCGAAACCAAACTTCATCGTC
CCTCTCGCCTTCTGCCCCTTGTGACCTCTCCCCGCTGTTTTACCTTTACCCGACCCGATACCTCTTCCTTTCCTCGTCTTGAGCTT
CCTCGGCACATTGTCTCTCAGATCGTTCAAGCTCAGTAGACTGTACGCCCTGATCCCCTGAAGCGACGAAACTCTGCTCGCCGATG
CAGGAATCTGAGTGAGGAGGATCGGGGATCGACGGCATTGTAGAAGCGGCGAGGAAGAGGTGATGAATCTGGGTTTGGAGGCGTGG
TGGTGAATCGAAGAATTGAGGAGTGGTGTTGAAATGATCGAAGAGATTCTTCTTCGAATCATCATCATCATCTTCGTTTGCAGATT
CCGATTTGGGGATTTAGGGTTTATGAGACTTTCAGATGCTGCCATCATTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002866628 ribosomal protein L15 family protein [Arabidopsis lyrata subsp. lyrata] | 792 | 4e-082 |
| NP_201272 ribosomal protein L18e/L15 [Arabidopsis thaliana] | 790 | 7e-082 |
| XP_002522195 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis] | 599 | 1e-059 |
| XP_002329967 predicted protein [Populus trichocarpa] | 598 | 1e-059 |
| XP_002298658 predicted protein [Populus trichocarpa] | 597 | 2e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A9H3K5 50S ribosomal protein L15 | 303 | 9e-027 |
| A5FZU6 50S ribosomal protein L15 | 292 | 2e-025 |
| Q5FU02 50S ribosomal protein L15 | 289 | 4e-025 |
| Q1WSA9 50S ribosomal protein L15 | 236 | 5e-019 |
| B9KZW9 50S ribosomal protein L15 | 229 | 3e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLF3 Genomic DNA, chromosome 5, P1 clone:MUB3 | 790 | 5e-082 |
| B9S876 60S ribosomal protein L10, mitochondrial, putative | 599 | 7e-060 |
| B9N3V7 Predicted protein | 598 | 9e-060 |
| B9GFG1 Predicted protein (Fragment) | 597 | 1e-059 |
| B8BBY6 Putative LSU ribosomal protein L15P | 543 | 2e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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