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Information for unigene UN23477
| FASTA Sequence |
| Unigene ID: UN23477 | Length: 1135 |
| SNP | GGGATCTCACACATCACACTATCCCTCAAACAAACAACACATATAAAAACTCCCTTCTTCTACAATTTTTGAAATAAACCCCTTAA
CTTTCAATTCTATCATCTAGCCCCCCCCCCTCTCCTACTCTAAATGGGTCAGTTCTTGAACCTCGCCGTGTTGGTGACCGTTCTTG
TTCTAACAATGGTCGGAACTGCTTACTCCGGAAGCTTCAACGAAGAGTTCGACTTGACATGGGGTGAACACAGAGGCAAAATCTTC
AGCGGAGGGAAAATGCTCTCACTGTCACTAGACCGGGTTTCCGGGTCAGGTTTCAAATCCAAGAAAGAGTACTTATTCGGAAGAAT
CGACATGCAGCTCAAGCTCGTCGCCGGAAACTCCGCCGGAACCGTCACTGCATATTACTTATCGTCGGAAGGACCAACACACGACG
AGATAGACTTTGAGTTTCTTGGTAACGAGACAGGGAAGCCTTATGTTCTTCACACTAATGTCTTTGCACAAGGCAAAGGAAACAGA
GAGCAACAGTTTTACCTCTGGTTCGACCCAACCAAGAACTTCCACACTTACTCCCTTGTCTGGAGACCTCAACACATCATATTTAT
GGTAGATAATGTACCAATCAGAGTATTCAACAACGCAGAGCAACTTGGTGTTCCGTTTCCCAAGAAGCAACCAATGAGGATCTACT
CGAGCCTATGGAATGCTGATGACTGGGCCACGAGAGGTGGTTTGGTCAAGACAGATTGGTCTAAAGCTCCTTTCACTGCTTACTAC
AGAGGCTTCAACGCCGCGGCTTGTACCGTTTCGTCAGGGTCCTCTTACTGTGATCCTAAGTTCAGGAGCACATTCGCTAATGGTGA
ATCACAAGTGGCTAACGAGCTTAATGCTTATGGGAGAAGAAGATTGAGATGGGTTCAAAAGTATTTCATGATTTATGATTATTGCT
CTGATGTTAAAAGGTTTCCTCAAGGATTCCCACCGGAGTGTAGGAGGTCTAGAGTCTAACAAACAATTATTCCTATCTCTCTTGTT
GTTTAGTGCAAATTCTCTTTGTTGTTGCTCTCTTTTTTTAATAAATTGATTTTCTTCATTGGATTTGGTTATTGTTTCAATGCGTA
TTCATTCTTACGAGCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883457 hypothetical protein ARALYDRAFT_479888 [Arabidopsis lyrata subsp. lyrata] | 1512 | 1e-165 |
| NP_566738 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1502 | 2e-164 |
| AAM61021 xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] | 1494 | 2e-163 |
| NP_193149 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1335 | 5e-145 |
| XP_002868312 hypothetical protein ARALYDRAFT_493497 [Arabidopsis lyrata subsp. lyrata] | 1331 | 1e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LG58 Probable xyloglucan endotransglucosylase/hydrolase protein 16 | 1502 | 9e-166 |
| Q38911 Probable xyloglucan endotransglucosylase/hydrolase protein 15 | 1335 | 2e-146 |
| P35694 Brassinosteroid-regulated protein BRU1 | 967 | 1e-103 |
| Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 23 | 951 | 7e-102 |
| Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 25 | 943 | 6e-101 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q680R2 Putative xyloglucan endotransglycosylase | 1502 | 1e-164 |
| Q5M726 At4g14130 | 1335 | 3e-145 |
| A2TEJ5 Xyloglucan endotransglycosylase/hydrolase XTH-21 | 1176 | 9e-127 |
| A9PBP3 Predicted protein | 1162 | 4e-125 |
| B9IA86 Predicted protein | 1153 | 4e-124 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G23730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1503 | 6e-167 |
| AT4G14130.1 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1348 | 6e-149 |
| AT4G25810.1 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 951 | 6e-103 |
| AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 949 | 1e-102 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 930 | 2e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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