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Information for unigene UN23479

FASTA Sequence
Unigene ID: UN23479Length: 967  SNP
TAGTAGTCAAGTTTTGGAAAGTGTTCTTAAAATTTTTGAAAGGTATAAGAGCAACAGAACAAATCATATAACTATAGAAGGTGACA
CTATTGCAACGAACAATATTACTGCTAAGCTAAAACAAATTTTAATTCCATCTTTCGTTTGTTTTTTCCTCTAAATCCTTCCCTTG
TAGCTGCATAACTTTTGTCAAATGTAAAAATAGTCCAAAATGATTTTCTAAAAAAAAAAAACAAATGTTTTGTTGTTTTGCAATGG
CCAACATTCATCATAAAAGTTGGTCAGATCAGTCCGCATTACGTGGGCCGCTGGCGCTTCGTCCACCATATTTCTGTTTGCCGAAG
CTGAAAGGGATGTACTTGTACTTGATCATGTGGGAGATCTGGCGTCTCATGGTGAGAACAAAGAGAACGATCCAATAGCAAAGCAG
GATAGGCCAGAACACAGGCACGTCAAACACCGAGAAGAACGTCATCACAAACGCAATGCAGAACGCCTTTGTCATCGAATACCAGA
ACTTGAACTCAGGGAGACGGCGGATGAAAGGCTTGAACTCATCAGAGCCTCTAGTAGGAAGCGAAGGTCCATCAGATCCCCCACCA
GCAGCCTCGGGATCAACGAGAGGGGACAAGAACCCGATGAGGAGATTCAAGAGGTAGATTCCGAGACCGTAAGCGATGATGTAGAA
TCCCTGGATGTAGTAAACCCTCAAACAGTAGGCGAGGGCCACGACGAGAGTCCCGATCCACCTGTAAGTAGCGTGAGGCGTGGTCT
TGTCGAGGTAATGCTGGTAGATCCTCCACGCCTCGTGTGCTTTCTGTTGAACCGGGGTCGCCACTGAACCACTATCACCTCCTCCG
CCTACGTCCATGGGAAGAAGATGAGAGATGCTTATCCAGAAATGGAGCAGATCTGACGAAAGACGCAACAAAACGCGAAATGAAGC
AAATGGATTTTGATCCGCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ92319 predicted protein [Hordeum vulgare subsp. vulgare]7503e-077
BAJ90775 predicted protein [Hordeum vulgare subsp. vulgare]6472e-065
BAK04477 predicted protein [Hordeum vulgare subsp. vulgare]6472e-065
XP_001516135 PREDICTED: protein RER1-like [Ornithorhynchus anatinus]5576e-055
NP_001006300 protein RER1 [Gallus gallus]5532e-054

Swiss-Prot top hits (Blast detail)Scoree value
O48670 Protein RER1A9533e-102
O48671 Protein RER1B8476e-090
Q9ZWI7 Protein RER1C6121e-062
A5PJ65 Protein RER15538e-056
Q5ZHM5 Protein RER15538e-056

TrEMBL top hits (Blast detail)Scoree value
A9PBA9 Putative uncharacterized protein7879e-082
Q657Y8 Os01g0106200 protein7511e-077
A2YGV0 Putative uncharacterized protein7412e-076
Q5Z9I1 Putative endoplasmatic reticulum retrieval protein Rer1B7412e-076
B4FUQ9 Putative uncharacterized protein7384e-076

Arabidopsis top hits (Blast detail)Scoree value
AT4G39220.1 ATRER1A9533e-103
AT2G21600.1 ATRER1B8476e-091
AT2G23310.1 ATRER1C16121e-063
AT2G23310.2 ATRER1C16031e-062
AT2G18240.1 RER1 protein, putative5341e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  2%
 
1012  21%
 
710  18%
 
126  11%
 
612  21%
 
202  4%
 
97  12%
 
191  2%
 
86  11%

Unigene MembersMember information