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Information for unigene UN23483
| FASTA Sequence |
| Unigene ID: UN23483 | Length: 985 |
| SNP | GGGAGATTTCGACGGTCAAGTTTCAGATCCTTTGAGAGATCATCGGAAAGTGATGACGGTCGCGGCGGGGATAGGGTACGCGCTTC
TTGCTCTGGGACCGTCTCTTTCACTCTTCGTCTCCGTCATCTCCAGAAAGCCCTTCCTCATCCTCACTCTTCTCTCCAGTACGTTG
GTGTGGCTTGTGAGTCTGATCGTCTTGTCTGGACTGTGGAGGCCGTTCCTTCCTCTGAAAGCCAATGTGGTGTGGCCTTATGCTTT
ACTTGTTCTCTCCTCTGTTTGCTTCCAGGAAGCTCTTCGCTTTCTTTTCTGGAAGCTTTACATGAGGCTTGAAGATGTCTTGGATT
CCTTTGCGGATCGGATCTCTAGGCCCCGCTTGTTTCTCACTGATAAGCTCCAGATTGCTCTCGCTGGTGGTTTAGGTCATGGTGTG
GCTCATGCTGTCTTCTTTTGTTTGAGTCTCTTAACTCCCGCATTTGGTCCAGCCACATTCTATGTCGACAGATGTTCGAAAGTCCC
ATTCTTTCTCATCTCTGCAATCATTGCTCTTGCATTTGTCACGATCCACACATTCTCGATGGTCATTGCTTTCGAAGGGTATGCAA
AAGGGAACAGAGTAGATCAAGTTATAGTTCCAGTCATACACCTTTCTGCTGGAATGTTGACATTGGTGAATTTTGCATCGGAAGGC
TGTATGATTGGCGTTCCTCTTCTTTACCTTGTGGCATCACTGACTCTTCTGCATTGTGGAAAGATGGTTTGGCAAAGGCTTATCGA
AAGCCGGAACCAAAGTGGCTCGACCTTACGGTGATCTAGCCTCAGGCTCAGTCTTTTAGGCTTTATCCTCTTTAACTGCGTCAAAA
CTTAAATGTTATGTTCTTTTTTCTTTCTTAACGCAACTATGATCCTGTATTGTCGAAAACTTTGACAAAATTTGATCTACTTTTTA
TAAACTTATATTAACACAGTATAAAATTAATTATGTTAC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_565724 gamma-secretase subunit APH1-like protein [Arabidopsis thaliana] | 1192 | 1e-128 |
| XP_002881176 protein binding protein [Arabidopsis lyrata subsp. lyrata] | 1192 | 1e-128 |
| AAM65980 unknown [Arabidopsis thaliana] | 1189 | 3e-128 |
| XP_002534115 gamma-secretase subunit aph-1, putative [Ricinus communis] | 1039 | 8e-111 |
| XP_002264306 PREDICTED: hypothetical protein [Vitis vinifera] | 1027 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L9G7 Gamma-secretase subunit APH1-like | 1192 | 6e-130 |
| Q9VQG2 Gamma-secretase subunit Aph-1 | 257 | 2e-021 |
| Q8C7N7 Gamma-secretase subunit APH-1B | 238 | 3e-019 |
| Q8WW43 Gamma-secretase subunit APH-1B | 235 | 6e-019 |
| Q5RDM3 Gamma-secretase subunit APH-1B | 232 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T796 Gamma-secretase subunit aph-1, putative | 1039 | 5e-111 |
| B9HH67 Predicted protein | 1026 | 2e-109 |
| B7FMF9 Putative uncharacterized protein | 997 | 4e-106 |
| C6TIC9 Putative uncharacterized protein | 981 | 3e-104 |
| C6TNE9 Putative uncharacterized protein | 975 | 1e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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