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Information for unigene UN23539
| FASTA Sequence |
| Unigene ID: UN23539 | Length: 1730 |
| SNP | GGAAGATGGGATCCAGACTGTTCTCTCAAATATAAATAAAACCCACTCTTCATATTATAATCTTATTACTTTCTACACACTCATTC
ATCACTCACTATATAAACACACACTCACAAACACTAAAACCCACAAGATCAAATCAAGATCCAAGAAAAATGAGAACCCAACTCAT
CTTTCTACTCATCTCTCTCTTAGCCTTGAACTCTGAATCACTAAACTGCTATGAAAATAACCCACGAGGCCATCCCTCAGATCTAA
GAGTGTTCCATATTAGCAGCCCTTGCTGTCCATTCAAACAACCAAACACTGTCTCATGGGAAACAACACTCCTTAAAGACAAGGCT
CGTCTCCAGTACTTGTCAAGCCTCGCCGTAAAATCTTCGGTCCCAATCGCCTCGGGACGTGCCATCGTTCAGAGCCCGACTTATAT
CGTGAGGGCTAATATTGGGACACCGGCTCAGCCCATGCTCGTGGCTCTTGACACTAGCAATGACGCTGCTTGGGTTCCTTGTTCTG
GCTGTGTTGGCTGTGCTTCTTCTGTTCTCTTTGACCCTTCCAAGTCAAACTCTTCCCGCACTCTTCAATGCGAAGCTCCTCAGTGT
AAACAGGCTCCAAACCCAACGTGCACCGTAGGCAAATCATGTGGTTTCAATATGACTTATGGTGGATCAGCCATCACAGCATCTCT
GACACAAGATACACTAACACTAGCCAATGACGTCATCCCAAACTACACTTTTGGTTGCATCAACCAAGCCACTGGAACATCGTTGC
CAGCGCAAGGACTCATGGGTTTAGGTCGTGGTCCATTGTCTTTAATCTCACAGACACAAAGTCTTTATATGTCCACGTTCTCGTAT
TGCTTGCCTAATAGTAAGTCCAGCAACTTCTCGGGATCGTTGAGATTGGGACCTAAGTTTCAACCACTTAGGATCAAGACAACTCC
ATTGTTGAAGAACCCTAGGAGGTCCTCTCTTTATTATGTTAACTTGGTCGGGATTCGTGTCGGGAATAAGATTGTGGATATTCCTA
CAAGTGCACTCGCCTTTGATCCGGCCACAGGAGCTGGCACCATCTTTGACTCTGGAACGGTCTTCACGAGGCTAGTTGAACCAGCT
TACCTTGCCGTAAGAGATGAGTTCAGACGACGCGTCAAGAACGCAAACGCAACATCACTCGGAGGTTTTGACACTTGCTACTCCGG
CTCTGTTGTCTTCCCACCTGTCACGTTTATGTTTGCGGGAATGAACGTGACTCTGCCTCCGGACAATCTTCTCATCCACAGCTCCT
CCGGCAACACCAGTTGCCTCGCCATGGCCGCAGCTCCGAACAACGTAAACTCTGTCCTTAACGTTATCGCTAGTATGCAGCAGCAG
AACCACCGTGTCCTCATCGACGTACCCAATTCCAGGCTCGGCATTTCCCGTGAAACATGCACCTAATTAAAATATGTGCGTGGTTG
TGTTTTTGTACTATCTATCTATCGCGTTTTAAACTTCTTGAGTTTGGAAACAATATAAATTGAAGATTTTTGTGTGTGTTTGATTA
TCAACATTATCGGTTACAGGTGTTGCCATTGAGTGCTATAAACTGCAGGCTCTTCTACATAATGCGAATTAAGACTAATGTAACTA
ATGTATGATGAAACATGAATGATTTTTATAAATTAATATAAATGTATGTTGAAGCATGAATGAATTTTGTAATGTATGATAAAGCA
TGAAACAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34532 unnamed protein product [Thellungiella halophila] | 2059 | 9e-229 |
| AAM66983 nucleoid DNA-binding-like protein [Arabidopsis thaliana] | 1911 | 1e-211 |
| NP_191008 aspartyl protease family protein [Arabidopsis thaliana] | 1909 | 2e-211 |
| XP_002877976 hypothetical protein ARALYDRAFT_906847 [Arabidopsis lyrata subsp. lyrata] | 1905 | 7e-211 |
| XP_002513044 Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] | 1501 | 5e-164 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q766C3 Aspartic proteinase nepenthesin-1 | 445 | 6e-043 |
| Q766C2 Aspartic proteinase nepenthesin-2 | 394 | 5e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L934 Nucleoid DNA-binding-like protein | 1911 | 9e-212 |
| Q9M2U7 AT3g54400/T12E18_90 | 1909 | 2e-211 |
| B9RG92 Aspartic proteinase nepenthesin-1, putative | 1501 | 3e-164 |
| A9PBM7 Predicted protein | 1499 | 5e-164 |
| A9P9A2 Putative uncharacterized protein | 1491 | 5e-163 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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