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Information for unigene UN23556

FASTA Sequence
Unigene ID: UN23556Length: 877  SNP
GGCTCCTCCTCTGACCACGAAGCTCTGGAAAGCAGGAAGCCGTAAACCTTTTTTTCCACCTTCTAGTGTTCTTCGTCGTCGTTTAC
TGAAACTGCCAAGATGTTCTCTGCTCAGAACAAGATCCACAAGGATAAGGGTGTTGCACCAACTGAGTTTGAGGAGCGAGTTGCTC
AGGCTTTCTTTGATTTGGAGAACACCAATCAGGAGTTGAAAAGTGACTTGAAAGATCTCTACATTAACCAAGCTGTTTCAATGGAT
ATTGCTGGCAACCGCAAGGCTGTTGTGATCTACGTTCCATTCAGACTGAGGAAAGCTTTCCGCAAGATCCATCCTCGTCTCGTCAG
AGAACTCGAGAAGAAGTTCAGTGGTAACGATGTTATCTTTGTTGCCACCAGAAGAATCATGCGTCCTCCTAAGAAAGGCTCTGCTG
TTCAGAGACCACGCAACAGGACTCTCACTTCCGTCCACGAAGCCATGCTTGAGGATGTCGCTTACCCTGCTGAGATTGTCGGAAAG
CGTACCAGATACCGTGTTGATGGCACCAAGATCATGAAGGTCTATTTGGAGCCTAAGGAGAGGAATAACACTGAGTACAAGCTTGA
GACAATGGTTGGTGTGTACAGGAAACTTACAGGGAAAGATGTAGTTTTCGAGTACCCAGTCGCTGAAGCTTGAGGAGATACAATGT
TGTTTTAATTCTTCTTTTTTGTCGGATAGTTTTGGTTCTGTTTGAGAGTAAAAAAACTCTTTGGAAAGATTTTCTTGTTAAAGTTG
CTTCACACTCTTCCTCCTATTTCTGTTTAATAAGACCTTTCTTATGTTGTTCTAGCATTCACAGTTTCACAAACATCATCTAAAAA
AATCAAATCGAATTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q9XH45 RecName: Full=40S ribosomal protein S79563e-101
NP_186905 40S ribosomal protein S7-2 [Arabidopsis thaliana]8846e-093
XP_002882238 40S ribosomal protein S7 [Arabidopsis lyrata subsp. lyrata]8693e-091
AAM64364 40S ribosomal protein S7-like [Arabidopsis thaliana]8641e-090
XP_002871704 40S ribosomal protein S7 [Arabidopsis lyrata subsp. lyrata]8632e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q9XH45 40S ribosomal protein S79561e-102
Q9M885 40S ribosomal protein S7-28843e-094
Q8LD03 40S ribosomal protein S7-38621e-091
Q9C514 40S ribosomal protein S7-17866e-083
Q9ZNS1 40S ribosomal protein S77723e-081

TrEMBL top hits (Blast detail)Scoree value
Q1KUR6 Putative uncharacterized protein8621e-090
C6T2H2 Putative uncharacterized protein8397e-088
Q1KUM0 Putative uncharacterized protein8325e-087
C6SV96 Putative uncharacterized protein8227e-086
B9HBT7 Predicted protein (Fragment)8048e-084

Arabidopsis top hits (Blast detail)Scoree value
AT3G02560.1 40S ribosomal protein S7 (RPS7B)8852e-095
AT3G02560.2 40S ribosomal protein S7 (RPS7B)8852e-095
AT5G16130.1 40S ribosomal protein S7 (RPS7C)8629e-093
AT1G48830.1 40S ribosomal protein S7 (RPS7A)7874e-084
AT1G48830.2 40S ribosomal protein S7 (RPS7A)7874e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  17%
 
66  15%
 
124  10%
 
104  10%
 
1113  32%
 
84  10%
 
91  2%
 
192  5%

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