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Information for unigene UN25149

FASTA Sequence
Unigene ID: UN25149Length: 1248 SSR 
GGCTCTTTTGGGGACCCCGTCGCGCCCCTCGTGAAAAAGATATTATTATTATTATTTTTCTCTTCTTTGTATACCCGTTTTCGATT
TAGGGTACCCAATCTCTGCGATCAAAATCTCGGCTTTTTGCCGCACCATAAATCTTGTTCCGATTCTCCAATCCATTCCTTCGATT
CATCTCCACTGTTCACGAATCCAGCAGTGCTATCCTCCCCCTTCTCCTTTTGTACTGATTTAAAGATGGCAGCTAAAGCTAATAAT
CTTCCCGACAGTGAGGTTGTGCCATCAGCTGTTCGGGAGGTTACATCGATTCTTCGCGCGGCTCATGATATACATCCCACCCATCC
TCGGATTGCTTACCTATGTGTGTGTGGTGCCGCTGAGGAGTGTTTAAGCGCTGACCCCTTCCTACGTGGGAACGGTGTTCTCTTGT
TTGCGTTTCGTCTTAAACGCTGGACTGAAACCAATGATGAAACACTTGGGGATGGAAAATTGCGGCCTAGTGATGTACGTGACATC
CAGAGTTTCTATCTAGAATATTACCAGAAAAATATCCATGCTTTGTTCAAGTTTATCGAAGACTACAGACATTTTGAAGGATGGGG
CCCAGCGCCCATGCCTCTCTGGCCTACTCCTATGGACGGTTTCAAAGCTCTTAGAACTCTCAGTGTCAGGGCTGACAGGGCTGAAC
TTCTCACATATGCATGTGGAATTGCTCTTCCTCTCTACAAAGTCGTGGAGCATCTTTCTAAAGATGAGCAACTGCCTCCTGAGATT
TTGGAAGCCCACAATGAAGTGAAACGGCTAGCCGAAATCTTTAGGCCATACATGATTTATCCCAGCGATCCTTATAGTGATGATCA
TTTTATTTGGAGAATTCCTCAGATCAGGGCTGTCAAAAACGCACTTCGTGGAAAATTCTACCCTAGTAGTAATACTCAAGGCGATA
ACAATTCCGAAAACACAGAGATTATTGGCAATAATCCTGCGGACACGCCTGTGGGGATTAATTGGAGACCGATGATAGAGATAATT
AGTCTTCTATTGATTAGCTTTTTTGTGATATGTTTGTTTCAACTACTAATGTTTTAACTTTTTTTAATAGATTATGTGGAATCATC
ATAATTTCGATCGTTGATTTAAGTTTTTTGCATGTTTTTTGGATTGAGTTAATCTACTCCATGTCACATTAGTCAAAATTGTTTTG
ATTATCTTTTAATAATCGAAATAAGATAATTTGTGTTTTAACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAN72923 hypothetical protein VITISV_026987 [Vitis vinifera]2048e-014
XP_002283298 PREDICTED: similar to Callose synthase 3 [Vitis vinifera]2048e-014
CBI16456 unnamed protein product [Vitis vinifera]2048e-014
BAD62105 putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group]2021e-013
EEC81348 hypothetical protein OsI_24536 [Oryza sativa Indica Group]2021e-013

Swiss-Prot top hits (Blast detail)Scoree value
Q9LXT9 Callose synthase 31936e-014
Q9AUE0 Callose synthase 11911e-013
Q9SL03 Callose synthase 21911e-013
Q9SHJ3 Callose synthase 71579e-010
Q3B724 Callose synthase 51561e-009

TrEMBL top hits (Blast detail)Scoree value
A5C0X0 Putative uncharacterized protein (Fragment)2045e-014
B8B2Y5 Putative uncharacterized protein2029e-014
B9FR03 Putative uncharacterized protein2029e-014
Q5Z5B8 Putative callose synthase 1 catalytic subunit2029e-014
B8A395 Putative uncharacterized protein2011e-013

Arabidopsis top hits (Blast detail)Scoree value
AT2G30680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups (TAIR:AT2G31960.1); Has 38 Blast hits to 38 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2276e-019
AT5G13000.1 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups1935e-015
AT5G13000.2 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups1935e-015
AT1G05570.1 CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups1919e-015
AT2G31960.1 ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups1919e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  7%
 
114  29%
 
104  29%
 
123  21%
 
201  7%
 
181  7%

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