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Information for unigene UN25167
| FASTA Sequence |
| Unigene ID: UN25167 | Length: 654 |
SSR | SNP | CAGCATTTAAGACTTCATATGCATTCATTCTATACAAACACTAGAGGTCTTATATATTCAAAGTATGTTCTTTAAGTTACTTAACA
ACATTACATAGAACATAACAATGACACTAAAAACAGATAAGCATAAGTACACACACTTTCATGATTTTACTGAGCCAAAGCACTTG
TGTTGTACACAAGAAGAGCCCCTCCGGCAAGAATTCCGGCTAGTGTCACCGCCCAAATCGCCAAACCAGTGAGTCCTCCCTTGTAC
ACGTCACCACTCGCTGACCACTCGTCCTCGTTGTAGATAGGGCTGTATCCATCAACGTTAGCACCGTACTTGTCGACGAATTTGTA
AACACCATATCCCTTGCCCTTTCTGCCGGAAGCGTCGACGCCGTCCCTCAAGTCCATGCTGCCGTTAACTCCAAAGGGCTTGTCTG
TCTTGATCTTCTTGACGCCACTCGCGACGATCTTGAAGGAAGAAGGAGAAGCTCTTGTAAGCGACGGTAATCCTCTCGCCGACATC
TTCTCCACCGTGAAACCCGCAGGTTTCAATGTCACTGATGAAAGCATCACTGAAGCAGCCATGTTCTCTTCCTTCTCTCACAAGAT
CAAACTTCTCTTCTTCTTCTCTCTCTCTCTCTCGATCTCTACGTTCTCGCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| P49108 RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic; Flags: Precursor | 709 | 7e-073 |
| ABM54168 PSII 10Kd peptide [Brassica juncea] | 696 | 2e-071 |
| ABL97960 photosystem II 10kDa polytpeptide [Brassica rapa] | 681 | 1e-069 |
| AAO32060 photosystem II 10kDa polypeptide [Brassica rapa subsp. pekinensis] | 672 | 1e-068 |
| NP_178025 photosystem II subunit R [Arabidopsis thaliana] | 668 | 4e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 709 | 3e-074 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 673 | 5e-070 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 564 | 2e-057 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 558 | 1e-056 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 538 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1Z271 PSII 10Kd peptide | 696 | 2e-071 |
| A1YN01 Photosystem II 10kDa polytpeptide | 681 | 8e-070 |
| Q84XP6 Photosystem II 10kDa polypeptide (Fragment) | 672 | 9e-069 |
| Q0WWI7 PSII-R protein | 668 | 3e-068 |
| B4YYB9 ST244 | 659 | 3e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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