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Information for unigene UN26680
| FASTA Sequence |
| Unigene ID: UN26680 | Length: 793 |
| SNP | GGCAAAAATTTTTGCGTTTGGTACAACTTGTTTCCTATAGTTTCAAACAAAAACATAGGCTCAAAAACATATAATAGCTTGACAAA
ACGCATTTATCTCGCACAATATGTCCATAATTAACAACATCCGAAAATCTAATACACTTTGTTTCCTAACTCAACGAGAAACACTA
CGAATGTCTTTAAGCAGACCCAACACTTGTTGCATTGTTGGCCGTTTCCCTGGCGTCTCCGCCGTACAGAAATAACCAATTCTAAG
ACTCTCGACCATCTCATTAACCGATTCTCCAGAAGCTAACCGCAATCTCGAGTCAAGAGCTTCCTCTCCTCTCCTCTCCTTAAACA
ACCGTCGAACTGATTTCACATGTTCCTCACTCCCTTGCTTACCGGTCAAAAGCTCAAACAAAATCACTCCAAAACAATACACATCG
AAGTCTAAATTGTTATTATCAGCATCGTTTCCTGTTTTTGCGATGTTGTTGATACCAAAATCAGATATTCGTGGCTCTAGGGTTTC
GGTTAGGAGGATGTTGGTAGCAACTAAGTGACCATGAGTAGTACCAACATGATGTAGATAGGCTAGACCACGTGCAACTCCAATAG
CGATACGGTGACGTATTAACCAGTTTGTTTTCTCTGGTGATGAATCTCCGACGTGACTCTCCCATGTATCGGCGCTCCAATCTTCG
ACGTTGGTTTCTCCTGTTGGGAGCTCGTGAAGCCATCGGTGAAGGTCTCCAGTAGCCATAAATTCATATAATATAACTTCTCTTTT
CCTGCGATGCAGTAACCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863453 hypothetical protein ARALYDRAFT_494402 [Arabidopsis lyrata subsp. lyrata] | 987 | 6e-105 |
| NP_199392 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | 981 | 3e-104 |
| AAS21681 receptor-like kinase [Arabidopsis thaliana] | 981 | 3e-104 |
| XP_002522226 receptor kinase, putative [Ricinus communis] | 703 | 5e-072 |
| XP_002317411 predicted protein [Populus trichocarpa] | 699 | 1e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGK9 Probable LRR receptor-like serine/threonine-protein kinase At2g24230 | 218 | 4e-017 |
| Q9LVN2 Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 | 204 | 2e-015 |
| C0LGS3 Probable LRR receptor-like serine/threonine-protein kinase At4g37250 | 150 | 3e-009 |
| C0LGS2 Probable LRR receptor-like serine/threonine-protein kinase At4g36180 | 133 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6QNV0 Receptor-like kinase | 981 | 2e-104 |
| Q9FK63 Leucine-rich repeat receptor-like protein kinase | 981 | 2e-104 |
| B9S8A7 Receptor kinase, putative | 703 | 3e-072 |
| B9I1K0 Predicted protein | 699 | 1e-071 |
| B9H2H0 Predicted protein | 686 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G45800.1 MEE62 (maternal effect embryo arrest 62); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 982 | 9e-107 |
| AT2G24230.1 leucine-rich repeat transmembrane protein kinase, putative | 218 | 4e-018 |
| AT5G58150.1 leucine-rich repeat transmembrane protein kinase, putative | 204 | 2e-016 |
| AT4G37250.1 leucine-rich repeat family protein / protein kinase family protein | 150 | 3e-010 |
| AT1G17230.1 ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 142 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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