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Information for unigene UN26682

FASTA Sequence
Unigene ID: UN26682Length: 1478 SSR 
ACACCGTGAGAGATTCGGGATAACGATGAATAGTGGCAACGTCCTATCGAAGTTGGCTCTATGCTTCTCCTCTTCCGAGGTCTTTT
TCCGGCGAGCTTACGGCGATGATGGAGTCTTTCGTTATTGCTCTGCCACCATCTTCGCACTTATCTTCATTCTTCTCTGCCAGATT
CTCCGGAAAGTTCGATTCTTTAGTCATGTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCCTCTGCTGTATCAGCTTCTCAATCTCTGATGAGCTCCCAATCAAGAATCTCCACACTTGTTTCTGATGAAGACCTAAAAG
ACCTTATTGAAAAACTGGGGGAGAGAAGTGATGATACCGAGATTTGGGAGGATGTTATTCAGAAAAGCAACCCTCGCGTGTCTTAC
ACTGCCAAATGCTGCAAACCACAAGATGGTGGTCCTATGAAGTACTTAAGCACCACGGTGTTTGAGGACTGCTCGCCAGAGGTTCT
GAGGGACTTTTACATGGACAATGAGTACAGGAAACAGTGGGATAAGACTGTGGTCGAGCATGAGCAGTTGCAGGTTGATAGTAACA
GCGGAATAGAGATTGGTCGCACCATAAAGAAGTTTCCTTTGTTGACACCAAGGGAGTATGTGTTAGCTTGGAGGTTGTGGGAGGGG
ACGGATAAGTTTTATTGTTTCATTAAGGAATGTGATCACAATATGGTGCCGCAGCAGAGGAAGTATGTACGTGTAAGTTATTTCAG
ATCTGGTTGGCGAATCAAGAAAGTTCCTGGTAGGGATGCTTGTGAGATCCACATGTTTCACCAGGAAGATGCTGGATTAAATGTTG
AGATGGCGAAGCTTGCTTTCTCAAGAGGCATATGGAGTTACGTTTGTAAGATGGACAGTGCGCTTCGTAAGTACATTGCAGCCAGT
CATAGACCCCAAGGGCCCACTATATCTGCTGTTAGCTTAATGCAAAAGATTCCATCAGAGTTAGAGAATCAGACAGATGACATCAC
AAACTCCTCGGGAACTATCATTACAGGTGAAGGAGCCAAAAGGAAGAAACTGTTGACAAAGCCTTCGAAGAAACAGTTAGCAAAGG
GTCTGTTACTCGTGGGAGGTGCGGTTGGTAGTGCAGTTTGCCTGTCTCGTGGTCACTCCGCCTTAGGTGCAAAGGTTGCATTGGCT
TACTTCTTGACAAAGCTGAGAAAGCGTGGAGCTCAGCAGAGTCAGACTTCCCAGAACGTTGGTATTTAACTCGTGTATAGATTTTG
TTTGATGAAACATATGCGACTCCTCCTAAGCTTGTGTGATAGGAGAGTTGTTTGTAGAAGTGATTTGACGTGTGAATACTGTCACA
TAAAAAAGATATATTATGCGATGGCTCTGACCATATGAGTTCTGTATCTTCAAAGTTTTGTACACCTCTCCTGGAAGACACTACAT
GTGCGTGAAGGATTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850574 lipid-binding START domain-containing protein [Arabidopsis thaliana]16403e-180
NP_566443 lipid-binding START domain-containing protein [Arabidopsis thaliana]15632e-171
BAC43323 unknown protein [Arabidopsis thaliana]15597e-171
NP_850573 lipid-binding START domain-containing protein [Arabidopsis thaliana]15534e-170
NP_564705 putative polyketide cyclase/dehydrase and lipid transport-like protein [Arabidopsis thaliana]12919e-140

Swiss-Prot top hits (Blast detail)Scoree value
Q9Z148 Histone-lysine N-methyltransferase, H3 lysine-9 specific 31273e-006
Q55G98 von Willebrand factor A domain-containing protein DDB_G02677581264e-006
O15417 Trinucleotide repeat-containing gene 18 protein1231e-005

TrEMBL top hits (Blast detail)Scoree value
Q94C36 At3g1306215632e-171
Q8GWN9 Putative uncharacterized protein15595e-171
Q3EB74 At3g1306215532e-170
Q93YV2 Putative membrane related protein CP512916e-140
B9N5D5 Predicted protein11402e-122

Arabidopsis top hits (Blast detail)Scoree value
AT3G13062.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55960.1); Has 230 Blast hits to 230 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).16418e-183
AT3G13062.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55960.1); Has 235 Blast hits to 235 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).15647e-174
AT3G13062.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55960.1); Has 235 Blast hits to 235 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).15531e-172
AT1G55960.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13062.2); Has 177 Blast hits to 177 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).12922e-142
AT5G54170.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: CP5 (TAIR:AT1G64720.1); Has 233 Blast hits to 233 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).4185e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  25%
 
103  75%

Unigene MembersMember information