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Information for unigene UN37754
| FASTA Sequence |
| Unigene ID: UN37754 | Length: 1847 |
| SNP | TTTTTTTTACCGGCATGGACATGTAGATATCAAATAAAATAGAAAAAAAGATTTCTTTATCTGAGTAATGAGTCATCTGACAATTC
ATGATTTAGATTCAACTACTTATTAATAAACTAATAGCAAGGAAGAAACAATTTGAGTTGATGCGTTTACCTAAGTAAGGACCAAT
AAAATAAAATATTTTGATCTTCGAAACCAATTAAATGAAATTCTAAAGGTTCAATTTTATGGGGCAGTGCGCGAGAAATCAAATTA
TAAATAAATGATAGAATTTTGAGCGCCCTGAAAATGCCATAATATATAACATTAAGATATATAAAGGTGTTCGGAAATGGTTGAAG
TAGATGAATAGGAGGATCGCTATGACTATAGCCCTTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATATTATGGATGACTG
GTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTGGGGGGTTGGTTCA
CAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT
TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATT
AGGCGGTCTGTGGGCTTTTGTTGCTCTCCACGGTGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG
TTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTCTTTCTAATTTATCCACTAGGTCAA
TCGGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATT
GAACCCATTTCATATGATGGGAGTCGCTGGTGTACTGGGCGCGGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAAATACTT
TATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAAC
CGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTT
ATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAG
ATCCGGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGATCAGCCTCAT
GAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATGGAACTTTAGCTTTAGCTGGTCGTGACCAAGAAA
CCACTGGTTTCGCTTGGTGGGCCGGGAATGCCCGACTTATCAATTTATCTGGTAAACTATTGGGAGCTCATGTAGCCCATGCCGGA
TTAATCGTATTCTGGGCCGGAGCAATGAACTTATTTGAAGTGACTCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGT
TATTCAACCATGGCTCCATTCGAAGAAGTTACTCGTTTTCACTCCCGTTGCTACTCCTGTCTACTAACTTTATTTCTTTATTGGCC
AAACAAGTTTCTATAATATAATCCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTAATAGTTGGTTTTGT
AATGTTTCACGTTGTTCATAATGAAGACAAAAGATGTTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAE47589 photosystem II protein D2 [Lactuca sativa] | 1893 | 2e-209 |
| NP_051054 photosystem II protein D2 [Arabidopsis thaliana] | 1891 | 3e-209 |
| AAS46043 photosystem II protein D2 [Oryza sativa Indica Group] | 1888 | 7e-209 |
| YP_001123194 PSII D2 protein [Arabis hirsuta] | 1888 | 7e-209 |
| YP_001123632 photosystem II protein D2 [Lepidium virginicum] | 1887 | 9e-209 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P56761 Photosystem II D2 protein | 1891 | 1e-210 |
| A4QKI7 Photosystem II D2 protein | 1891 | 1e-210 |
| A4QL14 Photosystem II D2 protein | 1891 | 1e-210 |
| A4QK13 Photosystem II D2 protein | 1888 | 3e-210 |
| A4QJB0 Photosystem II D2 protein | 1887 | 4e-210 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1L8N3 Photosystem II D2 protein | 1891 | 2e-209 |
| B7T3S0 Photosystem II D2 protein | 1881 | 3e-208 |
| B7T3Z1 Photosystem II D2 protein | 1881 | 3e-208 |
| D3WB26 Photosystem II D2 protein | 1881 | 3e-208 |
| A9QAY3 Photosystem II D2 protein (Fragment) | 1880 | 4e-208 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| ATCG00270.1 PSII D2 protein | 1892 | 8e-212 |
| ATCG00020.1 Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | 402 | 5e-039 |
| ATCG00280.1 chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. | 388 | 2e-037 |
| AT2G31980.1 cysteine proteinase inhibitor-related | 169 | 5e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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