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Information for unigene UN39778
| FASTA Sequence |
| Unigene ID: UN39778 | Length: 672 |
| SNP | GGATCTCTTCAAACAAATTCGGAATCACCCATTGTTAGCCACAACAACAGAGAATAGTGATCAAACCTCATGGCGTCTCTTGCAAC
CGTCGCCGCCGTGAAACCATCCGTCGCCGTAAAAGGTCTTGGCGGCAGCTCACTCGCCGGAGCCAAGCTCTCCTTCAAGCCTTCCC
GCTTAAGCATCAAAACCAAATCAATTCGGTCTGGTGGTGTGGTGGCTAAGTATGGTGACAAAAGTGTCTACTTTGATTTAGAAGAC
TTGGGAAACACAACAGGTCAATGGGATCTCTACGGCTCTGATGCTCCTTCTCCTTACAACCCTCTTCAGAGCAAGTTCTTTGAGAC
ATTCGCTGCACCATTCACAAAGAGAGGATTGCTCCTCAAGTTCTTGATCATCGGAGGAGGATCTTTGCTTACTTATGTCAGCGCTT
CCTCCACCGGAGATGTTCTTCCCATCAAGAGAGGTCCTCAGGAGAAGCCTAAGCTCGGTCCTCGCGGCAAACTCTGATTTAGATTT
TCATGCATATGTTTTGTTACCTTCTTTCCCCCTCTTTATAATCCCATAAACATTTCTCAATACCGCAAACTCTTTTAAGTGATTTT
GATTTTATTGTATATTCTGTTTCTCTGTTACATTTCCTTTTCCTAATTTTACAAATCTCAAGATTATTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188235 photosystem I reaction center subunit VI-1 [Arabidopsis thaliana] | 685 | 4e-070 |
| NP_175633 photosystem I reaction center subunit VI-2 [Arabidopsis thaliana] | 670 | 2e-068 |
| XP_002891683 hypothetical protein ARALYDRAFT_474340 [Arabidopsis lyrata subsp. lyrata] | 666 | 7e-068 |
| O04006 RecName: Full=Photosystem I reaction center subunit VI, chloroplastic; Short=PSI-H; AltName: Full=Light-harvesting complex I 11 kDa protein; Flags: Precursor | 664 | 1e-067 |
| ACU13848 unknown [Glycine max] | 607 | 5e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SUI7 Photosystem I reaction center subunit VI-1, chloroplastic | 685 | 2e-071 |
| Q9SUI6 Photosystem I reaction center subunit VI-2, chloroplastic | 670 | 1e-069 |
| O04006 Photosystem I reaction center subunit VI, chloroplastic | 664 | 6e-069 |
| P22179 Photosystem I reaction center subunit VI, chloroplastic | 579 | 4e-059 |
| O65101 Photosystem I reaction center subunit VI, chloroplastic | 523 | 1e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q0WWU6 At3g16140 | 685 | 3e-070 |
| C6SX75 Putative uncharacterized protein | 607 | 3e-061 |
| C6SWI9 Putative uncharacterized protein | 606 | 4e-061 |
| A9PG57 Putative uncharacterized protein | 602 | 1e-060 |
| Q7XA96 Photosystem I psaH protein | 598 | 4e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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