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Information for unigene UN42224

FASTA Sequence
Unigene ID: UN42224Length: 1814 SSRSNP
ATGAAAAGTATATATTTTATTTATTCGAATACAAGTAACAAATTTGCATTTTACATGAGAATAAGAATGGAAGAGAAAACAGAGCA
ACTTCAGCACACACATGTGTTGAAGAAAATTACTCCTTTTGCGTATTTTCAACAATCAAGAATCAATCACCACTTTTTCTTTTTCT
ATAGCTAAACCCTACAAATATATCACTGTAATATGACAAATGAGTCATTTATAAGTATTTTTTTTTCTTTTTTATAAAGAATAGTA
AATCTATATGTATTTCTTAAATTGGAGGAGCATCTTGAGGAGTGAAAACCCTGTGGTGGCAAGTAGGGTTACAGGGATAAGGACAA
TCTATCTTCTGAAACAATTTTCTGTCATAAACCCAATCTCCAACAGCTTTTGCTATTGTCGTTCGGTTTAGAATTGGAGAATCTTG
CCAGAACCATGAAGTTTGTGTCTCGGTTTGGCAGTGAGTGTAACAAGAGTCTATGAACATCCCTCTTGATGAAGATCTACCTAGAC
CTATCACCGCACTCAAGAACTCTAACCTGAAATCTTGCATAACTTTCAGCTGGTTTGGTTGGCAATTCTTGATGTCAAGTTGACAA
CTTTGCCATTTTCCATAAGGATCAGCAGCACGGGGAGCCAAAATGTTCTTTATCTGCCAAGAGTCGTATGCGGCATTAAGAATGAA
TACAGGAGTTCTAATCTGGCGAGCTACGTATTGCGGGAAGAAACACATTGCAGGGGTCAATCTTGATGTGCATGACCTCGGCAAGT
TCTTTGCTGATCCATGCAGAGTAACCACATCTTTGAAGTATGATTTAATGTATTGAGCTCCTGAGACATCTCTTGTATTGAGAAAG
AAACCAGCATCTGAAAGACATTTTACTTTGGTGCCCATCGGTAATAGGGCACGGAAACTGTCACAATGCATCAGGGAAGCTAACCC
GCCAGCAGAACACCCAGACAAAACAGCGTTCTCGGCGTTTCTCATGCCTTTAGCTAGCAACTCCTGCATAACGGCTAGCCAAACTC
GAGCACCTAGGGTTCACTGCTTGCACATCTCCTGTGAATGATGAACCGTCACAGTATCTAACTTTCACTCTGTTCCAATTGTAAAA
ATCAGGATTATATTGTTTCTTATTGCTGAGAATAGCTGAGAAGGCAAGATTCTCCACCATTTTCTTGGATGAACCTAATCTAGTAT
GCATCCGACTAAGGCAGTTTGTTACATTATTACACCATCCTCCTCCCTCAAGCTGTATCAAACAGCTGTTGATTCCAGTTCCAGAA
CCTCTGTGTAAATGATAAGTTGGTGGACTACCATCCAAACAAACGGCCCCTCTTGCGACGGCGTTTCTAACAAATGTAATATTGAC
AAACAATCCTTCTGCTTTCAAGATTGCTAACAAACATACCACAAGAGCCAACCATTTCTTGAAGTTGAACATTCTTTTCCTCTACG
TAGAAGAAATCAACGAGAAAAGAATCACTGGGAAAAGAATAAAAACTTTCTTGGACAGAAAGTTTCAGCCGCAATCGCACTTACTT
GGAAACGCGGTTTCTTACAAAACCCAACTTGGGATTAGTCTGAACCTCCAAGTTTCGGTTTGTTAACTCGGAGGATGACTCAGTTA
CTGCACATTGCCCGAGGACGCGAGTTCCGAGCAATGGGCGGGAGCAGAAAGATTCACGGAAGTAGTAAAGCGTTTATGCAAAGCGC
GTTTTGGATCCGACGTACAATGTTTTTTTTTCTGTGTGTGTGTGTTTTCCGGAACCCGAGAGCCGATACTGATTCGTTCGTTTTTT
GCTAAAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867938 pectinacetylesterase family protein [Arabidopsis lyrata subsp. lyrata]13332e-144
NP_193677 putative Pectinacetylesterase [Arabidopsis thaliana]13303e-144
NP_974575 putative Pectinacetylesterase [Arabidopsis thaliana]13303e-144
BAH20235 AT4G19420 [Arabidopsis thaliana]13303e-144
BAH57249 AT4G19420 [Arabidopsis thaliana]12883e-139

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9DHL8 AT4G19420 protein (Fragment)13302e-144
Q3E9Z0 Putative uncharacterized protein At4g19420.213302e-144
Q6DBP4 At4g1942013302e-144
C0Z3H0 AT4G19420 protein12882e-139
B9S1P6 Pectin acetylesterase, putative10472e-111

Arabidopsis top hits (Blast detail)Scoree value
AT4G19420.2 pectinacetylesterase family protein13319e-147
AT4G19420.1 pectinacetylesterase family protein13319e-147
AT4G19410.1 pectinacetylesterase, putative7905e-084
AT5G45280.2 pectinacetylesterase, putative7422e-078
AT5G26670.1 pectinacetylesterase, putative7323e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  38%
 
112  25%
 
61  13%
 
202  25%

Unigene MembersMember information