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Information for unigene UN42224
FASTA Sequence |
Unigene ID: UN42224 | Length: 1814 |
SSR | SNP | ATGAAAAGTATATATTTTATTTATTCGAATACAAGTAACAAATTTGCATTTTACATGAGAATAAGAATGGAAGAGAAAACAGAGCA
ACTTCAGCACACACATGTGTTGAAGAAAATTACTCCTTTTGCGTATTTTCAACAATCAAGAATCAATCACCACTTTTTCTTTTTCT
ATAGCTAAACCCTACAAATATATCACTGTAATATGACAAATGAGTCATTTATAAGTATTTTTTTTTCTTTTTTATAAAGAATAGTA
AATCTATATGTATTTCTTAAATTGGAGGAGCATCTTGAGGAGTGAAAACCCTGTGGTGGCAAGTAGGGTTACAGGGATAAGGACAA
TCTATCTTCTGAAACAATTTTCTGTCATAAACCCAATCTCCAACAGCTTTTGCTATTGTCGTTCGGTTTAGAATTGGAGAATCTTG
CCAGAACCATGAAGTTTGTGTCTCGGTTTGGCAGTGAGTGTAACAAGAGTCTATGAACATCCCTCTTGATGAAGATCTACCTAGAC
CTATCACCGCACTCAAGAACTCTAACCTGAAATCTTGCATAACTTTCAGCTGGTTTGGTTGGCAATTCTTGATGTCAAGTTGACAA
CTTTGCCATTTTCCATAAGGATCAGCAGCACGGGGAGCCAAAATGTTCTTTATCTGCCAAGAGTCGTATGCGGCATTAAGAATGAA
TACAGGAGTTCTAATCTGGCGAGCTACGTATTGCGGGAAGAAACACATTGCAGGGGTCAATCTTGATGTGCATGACCTCGGCAAGT
TCTTTGCTGATCCATGCAGAGTAACCACATCTTTGAAGTATGATTTAATGTATTGAGCTCCTGAGACATCTCTTGTATTGAGAAAG
AAACCAGCATCTGAAAGACATTTTACTTTGGTGCCCATCGGTAATAGGGCACGGAAACTGTCACAATGCATCAGGGAAGCTAACCC
GCCAGCAGAACACCCAGACAAAACAGCGTTCTCGGCGTTTCTCATGCCTTTAGCTAGCAACTCCTGCATAACGGCTAGCCAAACTC
GAGCACCTAGGGTTCACTGCTTGCACATCTCCTGTGAATGATGAACCGTCACAGTATCTAACTTTCACTCTGTTCCAATTGTAAAA
ATCAGGATTATATTGTTTCTTATTGCTGAGAATAGCTGAGAAGGCAAGATTCTCCACCATTTTCTTGGATGAACCTAATCTAGTAT
GCATCCGACTAAGGCAGTTTGTTACATTATTACACCATCCTCCTCCCTCAAGCTGTATCAAACAGCTGTTGATTCCAGTTCCAGAA
CCTCTGTGTAAATGATAAGTTGGTGGACTACCATCCAAACAAACGGCCCCTCTTGCGACGGCGTTTCTAACAAATGTAATATTGAC
AAACAATCCTTCTGCTTTCAAGATTGCTAACAAACATACCACAAGAGCCAACCATTTCTTGAAGTTGAACATTCTTTTCCTCTACG
TAGAAGAAATCAACGAGAAAAGAATCACTGGGAAAAGAATAAAAACTTTCTTGGACAGAAAGTTTCAGCCGCAATCGCACTTACTT
GGAAACGCGGTTTCTTACAAAACCCAACTTGGGATTAGTCTGAACCTCCAAGTTTCGGTTTGTTAACTCGGAGGATGACTCAGTTA
CTGCACATTGCCCGAGGACGCGAGTTCCGAGCAATGGGCGGGAGCAGAAAGATTCACGGAAGTAGTAAAGCGTTTATGCAAAGCGC
GTTTTGGATCCGACGTACAATGTTTTTTTTTCTGTGTGTGTGTGTTTTCCGGAACCCGAGAGCCGATACTGATTCGTTCGTTTTTT
GCTAAAAG
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GenBank top hits (Blast detail) | Score | e value |
XP_002867938 pectinacetylesterase family protein [Arabidopsis lyrata subsp. lyrata] | 1333 | 2e-144 |
NP_193677 putative Pectinacetylesterase [Arabidopsis thaliana] | 1330 | 3e-144 |
NP_974575 putative Pectinacetylesterase [Arabidopsis thaliana] | 1330 | 3e-144 |
BAH20235 AT4G19420 [Arabidopsis thaliana] | 1330 | 3e-144 |
BAH57249 AT4G19420 [Arabidopsis thaliana] | 1288 | 3e-139 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
B9DHL8 AT4G19420 protein (Fragment) | 1330 | 2e-144 |
Q3E9Z0 Putative uncharacterized protein At4g19420.2 | 1330 | 2e-144 |
Q6DBP4 At4g19420 | 1330 | 2e-144 |
C0Z3H0 AT4G19420 protein | 1288 | 2e-139 |
B9S1P6 Pectin acetylesterase, putative | 1047 | 2e-111 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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