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Information for unigene UN45947

FASTA Sequence
Unigene ID: UN45947Length: 1086  SNP
GGAAATCCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTCTCCTCTTCATCGCTCTATCTGTCTCCATCTACATCA
AGAAAATCGAGAATCATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGAAACTAAACCGAGGGGTTCAATT
CATGTATCTATCTCGGAAAAATGTCGTATCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAATTCAAAGC
ACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAGCTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACG
GTTTTTTGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATTATCAATGAAGATAGCTTCAGAGAAGGACAC
GAAAATCAGGTTGCAGGCTGATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAGTCAAACGCAAAAGTGC
AAATCATGAAGAGTCTCTTGCCACTCGTTGATAGTTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGAAG
ATCGATACGAGTTATCAGGGAATTTACAGGCAATTCGTTGAAGTGTTGAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAA
GCCTTTTGATCCTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGGCGGTTAAGGTAGGGATGATAACCGAGGAGCTTACCC
GGGGTTTTCTTCTAGGAGATCGGGTTCTGCGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGACTGCTTCACCT
TCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTCTTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAA
CATAGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTCATGGATTTATTTAATCAGAAGCTTCAGGTTCAT
GTCGCCAGTTTTGGTTTTTAACAAATAAGTTGATACAAATATTTTTTCGACCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893916 co-chaperone grpE family protein [Arabidopsis lyrata subsp. lyrata]8642e-090
NP_564475 co-chaperone grpE-like protein [Arabidopsis thaliana]8481e-088
AAM65596 putative heat shock protein [Arabidopsis thaliana]8481e-088
XP_002301021 predicted protein [Populus trichocarpa]5981e-059
XP_002285824 PREDICTED: hypothetical protein [Vitis vinifera]5901e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q8DJB3 Protein grpE3405e-031
A2C5L7 Protein grpE3281e-029
Q7V9C9 Protein grpE3226e-029
A2BNE2 Protein grpE3191e-028
Q7NDP1 Protein grpE3163e-028

TrEMBL top hits (Blast detail)Scoree value
Q8LA37 GrpE protein homolog8489e-089
Q9C8X4 GrpE protein homolog8489e-089
B9GUH1 GrpE protein homolog5989e-060
B9RJC6 GrpE protein homolog5692e-056
B9H786 Predicted protein5253e-051

Arabidopsis top hits (Blast detail)Scoree value
AT1G36390.1 co-chaperone grpE family protein8485e-091
AT1G36390.2 co-chaperone grpE family protein8485e-091
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization4571e-045
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization4571e-045
AT4G26780.1 AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization1253e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  38%
 
93  23%
 
82  15%
 
102  15%
 
111  8%

Unigene MembersMember information