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Information for unigene UN51201

FASTA Sequence
Unigene ID: UN51201Length: 1264  SNP
CTTGAAGCTGACGACTTTTTTATTCAAACGAAATCCAAACGAGGCCACTTAAGGACACACTCATAAATAAAACACACAAGCATTTA
GCTTAAAACTATAGCTAACATTACAATTCGAACGCATAAACACATAACTCTCTCCCTTGAACTCTTTCGAGAATGACATAATCAAG
AAAGTAACAGAGCATCAGCATCTTCATTTGGGGCAGACCGGGTCGAACGCAAACGGTCCAACGTTAAAGATACCGTAGATGAGCTG
GTTGATGACCACCGCAGATTTGCCCTTCCTTTTCTCCGGCTTGAGTACGGCACCTACATCTCCACCAAAAAGCTTTGACACTTTGT
TGCATTTGTAGTCCTTTGATTTCACAAGATACACACGACATCCCCTGAACCCGTAATTCGTCACCGTCTTCGGACCCAACAACAAG
AAGTATCCGTTCTTGTCCGTTTTGGTCTCTGCGACTATGTTCTTCTTGCTCTTACACAGTAGTCTCACAACAGCACCTTCAACGGG
TTTGGCGCCAATGAGTGAATCGGAAGAAGCGTATTGGCAGCTTTTGCAGAAAACCGTACCCTGAACGGCAACTAGGCTTCTGTTGA
ATTTTGGTGGGTAAACCGGTGGCCTCACCGGTGGCTTAGCTGGAGGGGAGACCGGTGGCTTGGCTGGAGGGGAGACCGGAGGCTTA
ACCGGGGCTTTGGTTGGGGGCTTAACAGGGGCTTTTGTCGGCGGGTAAACTGGAGGCTTAACTGGAGGTTTGGCCGGTGGTGAAAC
TGGTGGCTTAACCGGAGGTTTGACTGGGGGCTTAACAGGGGCTTTGGTCGGAGGGTAAACCGGGGGCTTAACCGGAGGTTTGGCTG
GGGGTGAAACTGGTGGCTTAACCGGAGGTTTGACTGGGGGCTTAACTGGAGCTTTGGTCGGAGGGTAAACCGGAGGTTTAACTGGA
GGTTTGGCTGGTGGAGAAACTGGTGGCTTAACCGGAGGTTTAGTTGGGGGCTTAACCGGGGATTTGGTTGGAGGGTAAACTGGAGG
CTTAACCGGAGGTTTAGAAGGTGGAGAAACTGGCGGCTTGACAGGGGCTTTTGCCGGTGGATGTGGGTGAGGGTGGTGGTGATGGG
GAGGATGTGGGTGGTGGTGGCCGTGGTGGTAAGGAGATGGAGCAGGAGCAGAGGAAGGCGTTTGGGTCACATGGTTCACTTCTTCA
GTGAAAGCACAAGAAGTGAAGCACCAAAGTGCAAGGAGACTCAACAATACACTCTACCCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174150 arabinogalactan protein 31 [Arabidopsis thaliana]15596e-171
XP_002893518 hypothetical protein ARALYDRAFT_473038 [Arabidopsis lyrata subsp. lyrata]11161e-119
BAF01102 putative proline-rich protein [Arabidopsis thaliana]11001e-117
NP_001077616 arabinogalactan protein 31 [Arabidopsis thaliana]10954e-117
NP_180935 arabinogalactan protein 30 [Arabidopsis thaliana]6591e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPQ6 Vegetative cell wall protein gp13551e-032
P14918 Extensin3423e-031
P54704 Spore coat protein SP853362e-030
Q9T0K5 Leucine-rich repeat extensin-like protein 33272e-029
Q38913 Extensin-12861e-024

TrEMBL top hits (Blast detail)Scoree value
Q9FZA2 At1g2829015594e-171
Q0WP47 Putative proline-rich protein11007e-118
P93013 At2g337906599e-067
B7GDB0 Predicted protein (Fragment)5316e-052
B7S3L4 Predicted protein (Fragment)5316e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G28290.1 AGP31 (arabinogalactan-protein 31)15602e-173
AT1G28290.2 AGP31 (arabinogalactan-protein 31)10961e-119
AT2G33790.1 AGP30 (ARABINOGALACTAN PROTEIN30)6604e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  18%
 
64  24%
 
122  12%
 
94  24%
 
102  12%
 
181  6%
 
211  6%

Unigene MembersMember information