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Information for unigene UN51309

FASTA Sequence
Unigene ID: UN51309Length: 1061  SNP
TTTTTGCCTCTTTTCTCCTTTGTTTCTATCCCATAGCCGTCGCTCTTCTCTTTACATCTAGACTTGTCAATGGGCAAAAAGATGAA
GAGACGCCACGAATCCGGTGTTGAAATAACCCCGGAGATAAGTTTGGGTGATTCAGAAATCTTAGTAACGCCAAAGAATCAGCAGA
AGGCCAAGAAGCGGAAGAAGCAAAACAAGATTGAATCCAAGAAGAACCTAAAGAAGGTTGAGATAATCCAAGAGCCAGAATCGAAC
AAGAACCTAAAGAAGATAATAGATGGATTAAGTGATCGTCTAAACGAGATGACTGAAATTGTCCAAAAACTAAAGGAGACTTCAGA
TCTACTTGAGAAGGAGAAAGAAACTCCAAAGAAAAAGGTGGTTGAGTGCTGTTTCGAATCTGAAGATGCGTTTCGTAACCACCAGA
AAACCGTTTTCGTTGAGGGATTCAGGTGTTCCCCTCCTAGGGGTGATATCAAGAGCGCATTGATAAAACACTTCAGTCCTTGTGGA
GAGGTATCAACGGTTTTTATTCCCTTTCATTGCCAAACCGGTGTTCCCATGGGATTTGCCTTCATCAATATGATAAAAGATTACGA
TAAGGCTTTAACACTCGATGGAAGTTACTTGGATGGACTGAGGCTTACGGTCAAGATGGCAATAAAGAGAGAGGAATACTATGTTT
TTACTAACCACAACGGTTGTGAACGTTGTGGTATTGCGTTGTCCACGCACATCAAGAAACAGAGGTTTGAGCAGTTTTACAGCAGA
AATAGATTGTCCTCTCAGATGACATGCGTACCTGTAACTAGGTGTCCCTAACAAGGGGTTGTTTTGTTGTTCCAATACAACAAATT
TCGTGTGTTCTCAAAGTGGTTCTGTTATGGGATTCATGCTATTTATTTTTCATAATTTATGCCTAAATATGTAGTGATGAAACTTC
TTTTTGTATCCAAGTCTTTTGGTTTTCAAAAATACTTTAGTTTTTTTGTATTTTGGGATCTATGCTATCTAGTTTCATAATTTAAG
CTTAAATATTTAATGATGAAATTTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002862832 hypothetical protein ARALYDRAFT_359344 [Arabidopsis lyrata subsp. lyrata]3094e-026
XP_002867513 hypothetical protein ARALYDRAFT_913813 [Arabidopsis lyrata subsp. lyrata]2038e-014
XP_002872567 hypothetical protein ARALYDRAFT_352204 [Arabidopsis lyrata subsp. lyrata]1723e-010
BAB02219 unnamed protein product [Arabidopsis thaliana]1591e-008
NP_188491 nucleolin [Arabidopsis thaliana]1591e-008

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q1PEP5 Nucleolin1597e-009
Q9LIH8 Similarity to nucleolin1597e-009
Q41042 L. (clone na-481-5)1507e-008
Q9FLI6 Gb|AAF69708.11491e-007
Q9LE48 Putative uncharacterized protein AT4g087501418e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding1594e-011
AT5G51730.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).1496e-010
AT1G72800.1 nuM1-related1291e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  17%
 
1110  43%
 
124  17%
 
82  9%
 
151  4%
 
201  4%
 
211  4%

Unigene MembersMember information