BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3257544563125).
1 sequences; 60 total letters
Query= RU05840
Length=877
Score E
Sequences producing significant alignments: (Bits) Value
yueji_01156 100 3e-26
> yueji_01156
Length=60
Score = 100 bits (52), Expect = 3e-26
Identities = 58/60 (97%), Gaps = 2/60 (3%)
Strand=Plus/Plus
Query 355 TGTCAGAAAAGCAGGATTTTCTTCATTG--CATGGTCCCCTGATACATCAAAGGTGAGAA 412
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1 TGTCAGAAAAGCAGGATTTTCTTCATTGAACATGGTCCCCTGATACATCAAAGGTGAGAA 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 44268
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3257544563125).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|