BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9979169316097).
1 sequences; 60 total letters
Query= RU02255
Length=731
Score E
Sequences producing significant alignments: (Bits) Value
yueji_01698 115 5e-31
> yueji_01698
Length=60
Score = 115 bits (60), Expect = 5e-31
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 234 GTTTGAAATTCTGTCCAAAGACATAGGAGTGCCCCTGGTGGCTTTCAAACTAAAAGACAG 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 GTTTGAAATTCTGTCCAAAGACATAGGAGTGCCCCTGGTGGCTTTCAAACTAAAAGACAG 1
Score = 108 bits (56), Expect = 1e-28
Identities = 60/61 (98%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36 CTGTCTTTTAGTTTTGAAAGCCACCAGGGGCACTCCTATGTCTTTGGACAGAATTTCAAA 95
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTGTCTTTTAG-TTTGAAAGCCACCAGGGGCACTCCTATGTCTTTGGACAGAATTTCAAA 59
Query 96 C 96
|
Sbjct 60 C 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 36822
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9979169316097).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|