BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_1079512893661).
1 sequences; 60 total letters
Query= RU06682
Length=1210
Score E
Sequences producing significant alignments: (Bits) Value
yueji_02539 104 2e-27
> yueji_02539
Length=60
Score = 104 bits (54), Expect = 2e-27
Identities = 60/62 (97%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 484 AACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGA 543
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1 AACAATCCAACACTTGGTGAATTCTGCTT--CAATGATAGGAAGAGCCGACATCGAAGGA 58
Query 544 TC 545
||
Sbjct 59 TC 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 61251
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_1079512893661).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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