BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3701366976342).
1 sequences; 60 total letters
Query= RU00002
Length=730
Score E
Sequences producing significant alignments: (Bits) Value
yueji_02955 115 5e-31
> yueji_02955
Length=60
Score = 115 bits (60), Expect = 5e-31
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 524 CTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCA 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCA 60
Score = 81.3 bits (42), Expect = 1e-20
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Minus
Query 686 TAGTATACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 730
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 56 TAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 12
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 36771
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3701366976342).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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