BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6236184477779).
1 sequences; 60 total letters
Query= RU01540
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
yueji_04641 110 9e-30
> yueji_04641
Length=60
Score = 110 bits (57), Expect = 9e-30
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 2 GGTTAAGTGATGGTTGAGATTGAAGAACTGAAGAAGTGAATGTCTACACGAGTGTTCATA 61
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Sbjct 60 GGTTAAGTGATGGTTGAGATTGAAGAACAGAAGAAGTGAATGTCTACACGAGTGTTCATA 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 12480
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6236184477779).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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