BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_5497193225632).
1 sequences; 60 total letters
Query= RU04742
Length=395
Score E
Sequences producing significant alignments: (Bits) Value
yueji_04874 79.4 3e-20
> yueji_04874
Length=60
Score = 79.4 bits (41), Expect = 3e-20
Identities = 43/44 (98%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 8 TCAACTCAAACCCTTCCATTCTTCTCCAGAGAGAGAGAGAGAGA 51
||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 TCAACTCAAACCCTTCCATTCTTCTCCAGAGAGCGAGAGAGAGA 44
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 20124
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_5497193225632).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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