BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3177391512758).
1 sequences; 60 total letters
Query= RU16550
Length=225
Score E
Sequences producing significant alignments: (Bits) Value
yueji_05798 111 2e-30
> yueji_05798
Length=60
Score = 111 bits (58), Expect = 2e-30
Identities = 58/58 (100%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 71 TGTAAACCTTGCCGTAGGTCCCTTCTCCGACCTTCTCCAGTTTCTCGAACGCGTCCAT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGTAAACCTTGCCGTAGGTCCCTTCTCCGACCTTCTCCAGTTTCTCGAACGCGTCCAT 58
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 11554
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_3177391512758).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|