BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7481129289112).
1 sequences; 60 total letters
Query= RU06745
Length=626
Score E
Sequences producing significant alignments: (Bits) Value
yueji_05898 81.3 1e-20
> yueji_05898
Length=60
Score = 81.3 bits (42), Expect = 1e-20
Identities = 46/47 (98%), Gaps = 1/47 (2%)
Strand=Plus/Minus
Query 86 AAGAAAAAGCTGA-GTAAAACTGATGAGGAAGGTTATACCCTTACTG 131
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 47 AAGAAAAAGCTGAAGTAAAACTGATGAGGAAGGTTATACCCTTACTG 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 32136
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7481129289112).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|