BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_1960903474568).
1 sequences; 60 total letters
Query= RU06448
Length=828
Score E
Sequences producing significant alignments: (Bits) Value
yueji_05969 94.7 1e-24
> yueji_05969
Length=60
Score = 94.7 bits (49), Expect = 1e-24
Identities = 53/54 (98%), Gaps = 1/54 (2%)
Strand=Plus/Plus
Query 218 TTCTTCTCA-TTTAGTTGGAGGGGTGGCTCCGGAATGAACCCAAAGCTTTGATG 270
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7 TTCTTCTCATTTTAGTTGGAGGGGTGGCTCCGGAATGAACCCAAAGCTTTGATG 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 41769
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_1960903474568).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|