BLASTN 2.12.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input: /tmp/rose_5522323230720).
1 sequences; 60 total letters
Query= RU06046
Length=1271
Score E
Sequences producing significant alignments: (Bits) Value
yueji_06240 102 1e-26
> yueji_06240
Length=60
Score = 102 bits (53), Expect = 1e-26
Identities = 53/53 (100%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 715 CTCAATGATTCTGATTACATCCCAACTTATGAAGACAAGGACGGTGACTGGAT 767
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 CTCAATGATTCTGATTACATCCCAACTTATGAAGACAAGGACGGTGACTGGAT 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 64362
Database: User specified sequence set (Input: /tmp/rose_5522323230720).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|